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DolJOral78_scaffold_1076

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1076_1
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175..384
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SQM0_HAHCH
Uncharacterized protein {ECO:0000313|EMBL:EXJ12213.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
hypothetical protein
DolJOral78_scaffold_1076_2
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

607..1047
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DUZ4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK17871.1}; TaxID=1208320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans R6-1
DolJOral78_scaffold_1076_3
unknown

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comp(1808..2305)
DNA (498bp) protein (166aa)

This feature has no annotations

DolJOral78_scaffold_1076_4
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2623..2961)
DNA (339bp) protein (113aa)
Tax=BJP_08E140C01_Syntrophobacterales_43_19
DolJOral78_scaffold_1076_5
unknown

Not on your lists

comp(2942..3070)
DNA (129bp) protein (43aa)

This feature has no annotations

DolJOral78_scaffold_1076_6
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3303..3767)
DNA (465bp) protein (155aa)
Periplasmic protein related to spheroblast formation n=1 Tax=Agarivorans albus MKT 106 RepID=R9PEZ9_AGAAL
Periplasmic protein related to spheroblast formation {ECO:0000313|EMBL:GAC99949.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans
hypothetical protein
DolJOral78_scaffold_1076_7
Beauveria bassiana, Beauveria, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

3871..5598
DNA (1728bp) protein (576aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QBE8_PSYCK
Sensor protein CpxA {ECO:0000313|EMBL:KGQ11008.1}; TaxID=1245745 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; Beauv
sensor signal transduction histidine kinase
DolJOral78_scaffold_1076_8
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5916..6344)
DNA (429bp) protein (143aa)
Transposase family protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GIM4_METAL
Transposase family protein {ECO:0000313|EMBL:EIC29051.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomic
hypothetical protein
DolJOral78_scaffold_1076_9
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6420..7457)
DNA (1038bp) protein (346aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
dihydroorotate dehydrogenase (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CME1_SIDLE rbh
DolJOral78_scaffold_1076_10
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7902..9245
DNA (1344bp) protein (448aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2B0_NITHN rbh
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:CDI01532.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.
Fis family transcriptional regulator
DolJOral78_scaffold_1076_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9405..10268)
DNA (864bp) protein (288aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Ca
GTP cyclohydrolase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000375BE2E rbh
hypothetical protein
DolJOral78_scaffold_1076_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10627..12537)
DNA (1911bp) protein (637aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C076_NITHN rbh
deoxyxylulose-5-phosphate synthase
DolJOral78_scaffold_1076_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12621..13508)
DNA (888bp) protein (296aa)
Geranyltranstransferase (=farnesyldiphosphate synthase) {ECO:0000313|EMBL:CDH46241.1}; EC=2.5.1.1 {ECO:0000313|EMBL:CDH46241.1};; EC=2.5.1.10 {ECO:0000313|EMBL:CDH46241.1};; TaxID=1400861 species="Bac
Farnesyl-diphosphate synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GN63_THISH rbh
farnesyl-diphosphate synthase
DolJOral78_scaffold_1076_14
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13514..13756)
DNA (243bp) protein (81aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Escherichia coli KOEGE 71 (186a) RepID=T8KCS1_ECOLX
DolJOral78_scaffold_1076_15
unknown

Not on your lists

comp(13792..13881)
DNA (90bp) protein (30aa)

This feature has no annotations

DolJOral78_scaffold_1076_16
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13907..15229)
DNA (1323bp) protein (441aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B510_9PROT rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
rimO; hypothetical protein
DolJOral78_scaffold_1076_17
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15437..15682
DNA (246bp) protein (82aa)
50S ribosomal protein L31 n=1 Tax=Methylotenera mobilis RepID=UPI00037EA4CC
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus
rpmE; 50S ribosomal protein L31
DolJOral78_scaffold_1076_18
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15999..17282
DNA (1284bp) protein (428aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Com
Citrate synthase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TC69_9GAMM
Citrate synthase
DolJOral78_scaffold_1076_19
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17633..18052)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GKC7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM73686.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
hypothetical protein
DolJOral78_scaffold_1076_20
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18085..18795)
DNA (711bp) protein (237aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000380B01A
DolJOral78_scaffold_1076_21
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19010..19339
DNA (330bp) protein (110aa)
Probable trans-acting regulatory HvrA protein n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D5D4_LARHH
Uncharacterized protein {ECO:0000313|EMBL:CDH46249.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
trans-acting regulatory HvrA protein
DolJOral78_scaffold_1076_trna_1
unknown

Not on your lists

19476..19546
DNA (71bp)
transferRNA
DolJOral78_scaffold_1076_22
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19698..20501
DNA (804bp) protein (268aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dihydrodipicolinate reductase (EC:1.17.1.8)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I2K4_PSEUO rbh
DolJOral78_scaffold_1076_23
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20658..21797
DNA (1140bp) protein (380aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=3 Tax=Escherichia coli RepID=M8RDN6_ECOLX
carA; carbamoyl phosphate synthase small subunit
DolJOral78_scaffold_1076_24
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21843..25067
DNA (3225bp) protein (1075aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Carbamoyl-phosphate synthase large chain n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E6R9_9GAMM rbh
carbamoyl-phosphate synthase large subunit
DolJOral78_scaffold_1076_25
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25085..25546
DNA (462bp) protein (154aa)
Transcription elongation factor GreA n=1 Tax=gamma proteobacterium HdN1 RepID=E1VM67_9GAMM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1400861 species="Bacteri
greA; transcription elongation factor
DolJOral78_scaffold_1076_26
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25788..28013)
DNA (2226bp) protein (742aa)
Adenylate/guanylate cyclase with Chase sensor n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IRA3_9GAMM rbh
adenylate cyclase
Tax=BJP_S1_SUB10_Methylophilales_55_32
DolJOral78_scaffold_1076_27
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28759..29502
DNA (744bp) protein (248aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1400861 speci
NAD-dependent protein deacylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDQ7_9BACT
silent information regulator protein Sir2
DolJOral78_scaffold_1076_28
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29626..30864)
DNA (1239bp) protein (413aa)
Cryptochrome DASH n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=CRYD_GLOVI
Putative Cryptochrome DASH {ECO:0000313|EMBL:CDI02292.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Compe
phrA; cryptochrome
DolJOral78_scaffold_1076_29
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31077..31844
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003663347
Predicted hydrolase or acyltransferase {ECO:0000313|EMBL:CDH47188.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Can
conserved protein of unknown function; putative hydrolase domain
Displaying items 1-30 of 36 in total

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