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DolJOral78_scaffold_2181

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2181_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..652
DNA (651bp) protein (217aa)
Acriflavin resistance protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BP54_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIJ33147.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DS
cation/multidrug efflux pump
DolJOral78_scaffold_2181_2
Treponema putidum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

840..1649
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Treponema medium ATCC 700293 RepID=S3JSM1_TREMD
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AIN93031.1}; TaxID=221027 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema putidum.;"
DolJOral78_scaffold_2181_3
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1753..2571
DNA (819bp) protein (273aa)
Methyltransferase, TIGR00027 family n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JD10_9PORP
Contig_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIX13115.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
hypothetical protein
DolJOral78_scaffold_2181_4
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2753..3682
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003759C65 rbh
proline/glycine betaine ABC transporter substrate-binding protein
Proline/glycine betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJD39874.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizob
DolJOral78_scaffold_2181_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3802..4971
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036BDF71 rbh
ABC transporter permease
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:EJC74425.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhi
DolJOral78_scaffold_2181_6
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4968..5912
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003692057 rbh
ABC-type proline/glycine betaine transport system, ATPase component {ECO:0000313|EMBL:EJJ27424.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhiz
proline/glycine betaine ABC transporter ATP-binding protein
DolJOral78_scaffold_2181_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5909..6658
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036886B3 rbh
binding-protein-dependent transport system inner membrane protein
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:EJJ27425.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rh
DolJOral78_scaffold_2181_8
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6707..8227)
DNA (1521bp) protein (507aa)
FAD-binding protein n=1 Tax=Thiothrix disciformis RepID=UPI00036417B6 rbh
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:KHD09558.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus T
FAD linked oxidase domain protein
DolJOral78_scaffold_2181_9
Babesia bigemina, Babesia, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

8323..9936
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RBS2_CUPTR
Uncharacterized protein {ECO:0000313|EMBL:CDR94644.1}; TaxID=5866 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Babesiidae; Babesia.;" source="Babesia bigemina.;"
hypothetical protein
DolJOral78_scaffold_2181_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10387..11769)
DNA (1383bp) protein (461aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysteinyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003624551 rbh
DolJOral78_scaffold_2181_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11826..12239)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003807049
OsmC family protein {ECO:0000313|EMBL:EIJ36676.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
putative redox protein, regulator of disulfide bond formation
DolJOral78_scaffold_2181_12
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12343..13344
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000371C8D0 rbh
Lysophospholipase {ECO:0000313|EMBL:KIL97465.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum
lysophospholipase
DolJOral78_scaffold_2181_13
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13615..14631
DNA (1017bp) protein (339aa)
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component n=11 Tax=Vibrio nigripulchritudo RepID=U4KCX2_9VIBR rbh
putative TRAP-type C4-dicarboxylate transport system, periplasmic component
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:CCN42013.1}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionace
DolJOral78_scaffold_2181_14
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14713..15264
DNA (552bp) protein (184aa)
Putative gluconate TRAP family transporter, DctQ subunit n=2 Tax=Vibrio fluvialis RepID=S7I242_VIBFL
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KKD01739.1}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photo
TRAP dicarboxylate transporter, DctQ component
DolJOral78_scaffold_2181_15
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15257..16579
DNA (1323bp) protein (441aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Vibrio marinus RepID=UPI00030A4644 rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EDM66647.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Mor
TRAP dicarboxylate transporter subunit DctM
DolJOral78_scaffold_2181_16
Vibrio brasiliensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16567..17076
DNA (510bp) protein (170aa)
Thermoresistant gluconokinase n=1 Tax=Vibrio brasiliensis LMG 20546 RepID=E8LRQ7_9VIBR
Thermoresistant gluconokinase {ECO:0000313|EMBL:EGA66660.1}; TaxID=945543 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio brasiliensis LMG 2
gluconate kinase
DolJOral78_scaffold_2181_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17101..18507
DNA (1407bp) protein (469aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphing
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZT5_HALH1 rbh
6-phosphogluconate dehydrogenase
DolJOral78_scaffold_2181_18
unknown

Not on your lists

comp(18732..20456)
DNA (1725bp) protein (575aa)

This feature has no annotations

DolJOral78_scaffold_2181_19
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20950..21447
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003807340
SH3 type 3 domain protein {ECO:0000313|EMBL:EHP94798.1}; Flags: Precursor;; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" s
DolJOral78_scaffold_2181_20
unknown

Not on your lists

comp(21550..21726)
DNA (177bp) protein (59aa)

This feature has no annotations

DolJOral78_scaffold_2181_21
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21810..22193
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000373A67A
Transposase {ECO:0000313|EMBL:KEQ11731.1}; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas montiporae.;"
transposase B
DolJOral78_scaffold_2181_22
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

comp(22214..23749)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000366C03C
spermidine synthase
Tax=BJP_IG2103_ACD39_50_23
DolJOral78_scaffold_2181_23
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23776..23994)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000378541F
Putative membrane protein {ECO:0000313|EMBL:EMI19239.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula
hypothetical protein
DolJOral78_scaffold_2181_24
unknown

Not on your lists

comp(24049..24207)
DNA (159bp) protein (53aa)

This feature has no annotations

DolJOral78_scaffold_2181_25
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(24207..25499)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037E7221 rbh
hypothetical protein Tax=GWC2_ACD39_50_8_curated
hypothetical protein
DolJOral78_scaffold_2181_26
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

comp(25496..26122)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00035E058B
hypothetical protein
Tax=BJP_IG2103_ACD39_50_23
DolJOral78_scaffold_2181_27
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26278..28110
DNA (1833bp) protein (611aa)
UvrABC system protein C n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNN5_9GAMM rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit C
DolJOral78_scaffold_2181_28
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28115..28666
DNA (552bp) protein (184aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EIJ32977.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EIJ32977.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteo
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNN4_9GAMM
DolJOral78_scaffold_2181_29
unknown

Not on your lists

28869..29165
DNA (297bp) protein (99aa)

This feature has no annotations

DolJOral78_scaffold_2181_30
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29188..30186
DNA (999bp) protein (333aa)
Peptide chain release factor 2 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNW9_9GAMM rbh
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=870187 species="Bacteria; Proteobacteria; Gammapro
peptide chain release factor 2
Displaying items 1-30 of 50 in total

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