name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
DolJOral78_scaffold_26_1
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..150)
|
nuoEF; NADH-quinone oxidoreductase subunit E/F fusion protein (EC:1.6.99.5)
Formate dehydrogenase, beta subunit n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKF0_9RHOB
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:EAP77831.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseova
|
|
DolJOral78_scaffold_26_2
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(619..1968)
|
Trimethylamine (TMA) monooxygenase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT63_RUEPO
tmm; Trimethylamine (TMA) monooxygenase
Trimethylamine (TMA) monooxygenase {ECO:0000313|EMBL:AAV94838.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria p
|
|
DolJOral78_scaffold_26_3
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2123..3448
|
ABC transporter, periplasmic substrate-binding protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT62_RUEPO
rbh
ABC transporter, periplasmic substrate-binding protein, putative
ABC transporter, periplasmic substrate-binding protein, putative {ECO:0000313|EMBL:AAV94839.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
|
|
DolJOral78_scaffold_26_4
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3492..4211)
|
Transcriptional regulator, GntR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT61_RUEPO
rbh
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AAV94840.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rueger
|
|
DolJOral78_scaffold_26_5
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4347..5711)
|
UPI0003D6B332 related cluster n=1 Tax=unknown RepID=UPI0003D6B332
rbh
ammonium transporter
rbh
Ammonium transporter {ECO:0000313|EMBL:AHD02010.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohali
|
|
DolJOral78_scaffold_26_6
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6146..7534
|
Sarcosine oxidase, beta subunit family protein n=1 Tax=Roseovarius sp. 217 RepID=A3VW21_9RHOB
rbh
Sarcosine oxidase, beta subunit family protein {ECO:0000313|EMBL:EAQ26651.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" sou
sarcosine oxidase, beta subunit family
|
|
DolJOral78_scaffold_26_7
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7547..7834
|
Sarcosine oxidase, delta subunit family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT27_RUEPO
sarcosine oxidase, delta subunit family
Sarcosine oxidase, delta subunit family {ECO:0000313|EMBL:AAV94874.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruege
|
|
DolJOral78_scaffold_26_8
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7831..10785
|
Sarcosine oxidase, alpha subunit family protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E0F6_9RHOB
rbh
Contig26, whole genome shotgun sequence {ECO:0000313|EMBL:KID12317.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
sarcosine oxidase, alpha subunit family
|
|
DolJOral78_scaffold_26_9
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10778..11338
|
Sarcosine oxidase, gamma subunit family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT29_RUEPO
sarcosine oxidase, gamma subunit family
Sarcosine oxidase, gamma subunit family {ECO:0000313|EMBL:AAV94872.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruege
|
|
DolJOral78_scaffold_26_10
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11385..12386)
|
UPI0003D1BE24 related cluster n=1 Tax=unknown RepID=UPI0003D1BE24
rbh
Contig26, whole genome shotgun sequence {ECO:0000313|EMBL:ETA51747.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
transcriptional regulator, AraC family
|
|
DolJOral78_scaffold_26_11
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12519..13169
|
DNA-binding protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT31_RUEPO
DNA-binding protein, putative
DNA-binding protein, putative {ECO:0000313|EMBL:AAV94870.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomero
|
|
DolJOral78_scaffold_26_12
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13264..13527
|
Putative bacteriophage-related protein {ECO:0000313|EMBL:EAR52003.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Ocea
|
|
DolJOral78_scaffold_26_13
unknown
|
Not on your lists |
13588..13773
|
This feature has no annotations |
|
DolJOral78_scaffold_26_trna_1
unknown
|
Not on your lists |
comp(13712..13784)
|
transferRNA
|
|
DolJOral78_scaffold_26_14
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13844..15184)
|
MscS Mechanosensitive ion channel n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AZ66_9RHOB
rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EDZ40948.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bact
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel
|
|
DolJOral78_scaffold_26_15
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15256..15825)
|
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FMQ4_PELBH
Uncharacterized protein {ECO:0000313|EMBL:KGM90020.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucos
hypothetical protein
|
|
DolJOral78_scaffold_26_16
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15862..16848
|
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVR8_RUEPO
D-isomer specific 2-hydroxyacid dehydrogenase family protein
D-isomer specific 2-hydroxyacid dehydrogenase family protein {ECO:0000313|EMBL:AAV93940.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rueg
|
|
DolJOral78_scaffold_26_17
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17101..18921
|
ggt2; gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ABV92421.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ABV92421.1};; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
Gamma-glutamyltransferase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQD5_DINSH
rbh
|
|
DolJOral78_scaffold_26_18
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19143..21647
|
Aminomethyl transferase family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVR5_RUEPO
rbh
aminomethyl transferase family protein
rbh
Aminomethyl transferase family protein {ECO:0000313|EMBL:AAV93943.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rueger
|
|
DolJOral78_scaffold_26_19 |
Not on your lists |
21775..22932
|
FAD dependent oxidoreductase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2G7_9RHOB
rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN94352.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative FAD-dependent glycerol-3-phosphate dehydrogenase protein
|
|
DolJOral78_scaffold_26_20
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22961..23617
|
UPI0003D6B600 related cluster n=1 Tax=unknown RepID=UPI0003D6B600
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AHC99986.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalidiv
|
|
DolJOral78_scaffold_26_21
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23750..24088
|
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
4-carboxymuconolactone decarboxylase domain/ alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQB8_9RHOB
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
|
|
DolJOral78_scaffold_26_22
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24271..25137
|
Glycosyl hydrolase, family 25 n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EZI2_9RHOB
rbh
Glycoside hydrolase {ECO:0000313|EMBL:KEJ88981.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter dongh
glycoside hydrolase
|
|
DolJOral78_scaffold_26_23
unknown
|
Not on your lists |
25470..25721
|
This feature has no annotations |
|
DolJOral78_scaffold_26_24
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25817..27124)
|
TRAP dicarboxylate family transporter, DctM subunit n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EX00_9RHOB
rbh
TRAP dicarboxylate family transporter, DctM subunit {ECO:0000313|EMBL:EBA15691.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;
TRAP dicarboxylate transporter-DctM subunit
|
|
DolJOral78_scaffold_26_25
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27121..27834)
|
Uncharacterized protein n=2 Tax=Ruegeria RepID=R0DVU9_9RHOB
rbh
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KJZ21670.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rue
hypothetical protein
|
|
DolJOral78_scaffold_26_26
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27957..28922)
|
Bacterial extracellular solute-binding protein, family 7 n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EX02_9RHOB
rbh
Bacterial extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:EBA15693.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobac
TRAP dicarboxylate transporter-DctP subunit
|
|
DolJOral78_scaffold_26_27
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28959..30203)
|
D-amino-acid dehydrogenase n=1 Tax=Ruegeria mobilis F1926 RepID=R0F484_9RHOB
rbh
FAD-binding oxidoreductase {ECO:0000313|EMBL:KJZ21668.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis.;
D-amino-acid dehydrogenase
|
|
DolJOral78_scaffold_26_28
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30383..30979)
|
Recombination protein RecR n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AVX5_9RHOB
rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" s
recR; recombination protein RecR
|
|
DolJOral78_scaffold_26_29
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31092..31436)
|
Nucleoid-associated protein rpsU n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FW64_9RHOB
Nucleoid-associated protein rpsU {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseo
hypothetical protein
|