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DolJOral78_scaffold_26

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Displaying items 1-30 of 172 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_26_1
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..150)
DNA (150bp) protein (50aa)
nuoEF; NADH-quinone oxidoreductase subunit E/F fusion protein (EC:1.6.99.5)
Formate dehydrogenase, beta subunit n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKF0_9RHOB
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:EAP77831.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseova
DolJOral78_scaffold_26_2
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(619..1968)
DNA (1350bp) protein (450aa)
Trimethylamine (TMA) monooxygenase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT63_RUEPO
tmm; Trimethylamine (TMA) monooxygenase
Trimethylamine (TMA) monooxygenase {ECO:0000313|EMBL:AAV94838.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria p
DolJOral78_scaffold_26_3
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2123..3448
DNA (1326bp) protein (442aa)
ABC transporter, periplasmic substrate-binding protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT62_RUEPO rbh
ABC transporter, periplasmic substrate-binding protein, putative
ABC transporter, periplasmic substrate-binding protein, putative {ECO:0000313|EMBL:AAV94839.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
DolJOral78_scaffold_26_4
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3492..4211)
DNA (720bp) protein (240aa)
Transcriptional regulator, GntR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT61_RUEPO rbh
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AAV94840.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rueger
DolJOral78_scaffold_26_5
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4347..5711)
DNA (1365bp) protein (455aa)
UPI0003D6B332 related cluster n=1 Tax=unknown RepID=UPI0003D6B332 rbh
ammonium transporter rbh
Ammonium transporter {ECO:0000313|EMBL:AHD02010.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohali
DolJOral78_scaffold_26_6
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6146..7534
DNA (1389bp) protein (463aa)
Sarcosine oxidase, beta subunit family protein n=1 Tax=Roseovarius sp. 217 RepID=A3VW21_9RHOB rbh
Sarcosine oxidase, beta subunit family protein {ECO:0000313|EMBL:EAQ26651.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" sou
sarcosine oxidase, beta subunit family
DolJOral78_scaffold_26_7
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7547..7834
DNA (288bp) protein (96aa)
Sarcosine oxidase, delta subunit family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT27_RUEPO
sarcosine oxidase, delta subunit family
Sarcosine oxidase, delta subunit family {ECO:0000313|EMBL:AAV94874.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruege
DolJOral78_scaffold_26_8
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7831..10785
DNA (2955bp) protein (985aa)
Sarcosine oxidase, alpha subunit family protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E0F6_9RHOB rbh
Contig26, whole genome shotgun sequence {ECO:0000313|EMBL:KID12317.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
sarcosine oxidase, alpha subunit family
DolJOral78_scaffold_26_9
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10778..11338
DNA (561bp) protein (187aa)
Sarcosine oxidase, gamma subunit family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT29_RUEPO
sarcosine oxidase, gamma subunit family
Sarcosine oxidase, gamma subunit family {ECO:0000313|EMBL:AAV94872.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruege
DolJOral78_scaffold_26_10
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11385..12386)
DNA (1002bp) protein (334aa)
UPI0003D1BE24 related cluster n=1 Tax=unknown RepID=UPI0003D1BE24 rbh
Contig26, whole genome shotgun sequence {ECO:0000313|EMBL:ETA51747.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
transcriptional regulator, AraC family
DolJOral78_scaffold_26_11
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12519..13169
DNA (651bp) protein (217aa)
DNA-binding protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT31_RUEPO
DNA-binding protein, putative
DNA-binding protein, putative {ECO:0000313|EMBL:AAV94870.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomero
DolJOral78_scaffold_26_12
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13264..13527
DNA (264bp) protein (88aa)
Putative bacteriophage-related protein {ECO:0000313|EMBL:EAR52003.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Ocea
DolJOral78_scaffold_26_13
unknown

Not on your lists

13588..13773
DNA (186bp) protein (62aa)

This feature has no annotations

DolJOral78_scaffold_26_trna_1
unknown

Not on your lists

comp(13712..13784)
DNA (73bp)
transferRNA
DolJOral78_scaffold_26_14
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13844..15184)
DNA (1341bp) protein (447aa)
MscS Mechanosensitive ion channel n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AZ66_9RHOB rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EDZ40948.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bact
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel
DolJOral78_scaffold_26_15
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15256..15825)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FMQ4_PELBH
Uncharacterized protein {ECO:0000313|EMBL:KGM90020.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucos
hypothetical protein
DolJOral78_scaffold_26_16
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15862..16848
DNA (987bp) protein (329aa)
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVR8_RUEPO
D-isomer specific 2-hydroxyacid dehydrogenase family protein
D-isomer specific 2-hydroxyacid dehydrogenase family protein {ECO:0000313|EMBL:AAV93940.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rueg
DolJOral78_scaffold_26_17
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17101..18921
DNA (1821bp) protein (607aa)
ggt2; gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ABV92421.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ABV92421.1};; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
Gamma-glutamyltransferase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQD5_DINSH rbh
DolJOral78_scaffold_26_18
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19143..21647
DNA (2505bp) protein (835aa)
Aminomethyl transferase family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVR5_RUEPO rbh
aminomethyl transferase family protein rbh
Aminomethyl transferase family protein {ECO:0000313|EMBL:AAV93943.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rueger
DolJOral78_scaffold_26_19

Not on your lists

21775..22932
DNA (1158bp) protein (386aa)
FAD dependent oxidoreductase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2G7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN94352.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative FAD-dependent glycerol-3-phosphate dehydrogenase protein
DolJOral78_scaffold_26_20
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22961..23617
DNA (657bp) protein (219aa)
UPI0003D6B600 related cluster n=1 Tax=unknown RepID=UPI0003D6B600
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AHC99986.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalidiv
DolJOral78_scaffold_26_21
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23750..24088
DNA (339bp) protein (113aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
4-carboxymuconolactone decarboxylase domain/ alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQB8_9RHOB
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
DolJOral78_scaffold_26_22
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24271..25137
DNA (867bp) protein (289aa)
Glycosyl hydrolase, family 25 n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EZI2_9RHOB rbh
Glycoside hydrolase {ECO:0000313|EMBL:KEJ88981.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter dongh
glycoside hydrolase
DolJOral78_scaffold_26_23
unknown

Not on your lists

25470..25721
DNA (252bp) protein (84aa)

This feature has no annotations

DolJOral78_scaffold_26_24
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25817..27124)
DNA (1308bp) protein (436aa)
TRAP dicarboxylate family transporter, DctM subunit n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EX00_9RHOB rbh
TRAP dicarboxylate family transporter, DctM subunit {ECO:0000313|EMBL:EBA15691.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;
TRAP dicarboxylate transporter-DctM subunit
DolJOral78_scaffold_26_25
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27121..27834)
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Ruegeria RepID=R0DVU9_9RHOB rbh
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KJZ21670.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rue
hypothetical protein
DolJOral78_scaffold_26_26
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27957..28922)
DNA (966bp) protein (322aa)
Bacterial extracellular solute-binding protein, family 7 n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EX02_9RHOB rbh
Bacterial extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:EBA15693.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobac
TRAP dicarboxylate transporter-DctP subunit
DolJOral78_scaffold_26_27
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28959..30203)
DNA (1245bp) protein (415aa)
D-amino-acid dehydrogenase n=1 Tax=Ruegeria mobilis F1926 RepID=R0F484_9RHOB rbh
FAD-binding oxidoreductase {ECO:0000313|EMBL:KJZ21668.1}; TaxID=379347 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis.;
D-amino-acid dehydrogenase
DolJOral78_scaffold_26_28
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30383..30979)
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AVX5_9RHOB rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" s
recR; recombination protein RecR
DolJOral78_scaffold_26_29
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31092..31436)
DNA (345bp) protein (115aa)
Nucleoid-associated protein rpsU n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FW64_9RHOB
Nucleoid-associated protein rpsU {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseo
hypothetical protein
Displaying items 1-30 of 172 in total

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