ggKbase home page

DolJOral78_scaffold_51

Search features with annotation key words

Displaying items 1-30 of 128 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_51_1
Sulfurovum sp. FS08-3, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..463
DNA (462bp) protein (154aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BEL3_CHLPD
Uncharacterized protein {ECO:0000313|EMBL:KIM07774.1}; Flags: Fragment;; TaxID=1539065 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS08-3.;"
hypothetical protein
DolJOral78_scaffold_51_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(458..1921)
DNA (1464bp) protein (488aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl
3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Thiothrix disciformis RepID=UPI00037143A2 rbh
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
DolJOral78_scaffold_51_3
Plesiomonas shigelloides, Plesiomonas, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1979..2290
DNA (312bp) protein (104aa)
N-acetyltransferase GCN5 n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8AQW0_PLESH
histone acetyltransferase
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EON88718.1}; TaxID=1315976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Plesiomonas.;" source="Plesiomonas
DolJOral78_scaffold_51_4
unknown

Not on your lists

2380..2886
DNA (507bp) protein (169aa)

This feature has no annotations

DolJOral78_scaffold_51_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2883..4742)
DNA (1860bp) protein (620aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EIJ35577.1}; EC=3.6.1.- {ECO:0000313|EMBL:EIJ35577.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotricha
ATP-dependent DNA helicase RecQ n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BW34_9GAMM rbh
Superfamily II DNA helicase
DolJOral78_scaffold_51_6
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4845..5474
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AVR5_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ42244.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacte
PBP family phospholipid-binding protein
DolJOral78_scaffold_51_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5619..6575
DNA (957bp) protein (319aa)
magnesium/nickel/cobalt transporter CorA n=1 Tax=Thiothrix disciformis RepID=UPI00036E00D3 rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix niv
magnesium and cobalt transport protein CorA
DolJOral78_scaffold_51_8
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6584..8950)
DNA (2367bp) protein (789aa)
gt51B; murein polymerase (EC:2.4.1.129)
Murein polymerase, putative, gt51B {ECO:0000313|EMBL:ACE84401.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACE84401.1};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pse
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036A594F rbh
DolJOral78_scaffold_51_9
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9001..9873)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00035C3685 rbh
hypothetical protein
Drug metabolite exporter family {ECO:0000313|EMBL:ESA34908.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Is
DolJOral78_scaffold_51_10
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9942..10871
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGB5_9RHIZ
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AHB49085.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyp
DolJOral78_scaffold_51_11
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10938..11147)
DNA (210bp) protein (70aa)
cold-shock protein n=1 Tax=Thiothrix disciformis RepID=UPI00036DBEAD
Cold shock protein cspV {ECO:0000313|EMBL:GAB56749.1}; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola punicea
cspA; cold shock-like protein cspG
DolJOral78_scaffold_51_12
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11610..12992
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000365E864 rbh
cytochrome P450
Cytochrome P450(BM-3) {ECO:0000313|EMBL:EXJ12835.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
DolJOral78_scaffold_51_13
unknown

Not on your lists

comp(13265..13501)
DNA (237bp) protein (79aa)

This feature has no annotations

DolJOral78_scaffold_51_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13897..17892
DNA (3996bp) protein (1332aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
ribonucleoside-diphosphate reductase n=1 Tax=Thiothrix disciformis RepID=UPI00037638A2 rbh
DolJOral78_scaffold_51_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17914..19287
DNA (1374bp) protein (458aa)
nrdF; ribonucleoside-diphosphate reductase beta subunit (EC:1.17.4.1)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003744D10 rbh
Ribonucleotide reductase {ECO:0000313|EMBL:EIJ35308.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 520
DolJOral78_scaffold_51_16
Glaciecola pallidula, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19863..21482
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000360283D rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC28124.1}; TaxID=1121922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola pallidu
RND family efflux transporter MFP subunit
DolJOral78_scaffold_51_17
Glaciecola pallidula, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21482..24586
DNA (3105bp) protein (1035aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003751FF6 rbh
Cation/multidrug efflux pump {ECO:0000313|EMBL:GAC28125.1}; TaxID=1121922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola pa
cation/multidrug efflux pump
DolJOral78_scaffold_51_18
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24787..26322
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00037A9800 rbh
amino acid carrier protein
Sodium/alanine symporter {ECO:0000313|EMBL:GAF53781.1}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
DolJOral78_scaffold_51_19
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26572..26922
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037F1229
DNA-binding protein, putative {ECO:0000313|EMBL:EAP75812.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius n
XRE family transcriptional regulator
DolJOral78_scaffold_51_20
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26958..27533)
DNA (576bp) protein (192aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZ50_9GAMM
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:EIJ36643.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source
acyltransferase family protein
DolJOral78_scaffold_51_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27937..28299)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003774CFB
Dihydroneopterin aldolase {ECO:0000313|EMBL:EIJ33839.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 52
dihydroneopterin aldolase
DolJOral78_scaffold_51_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28381..28680)
DNA (300bp) protein (100aa)
AAA-ATPase-like protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BY56_9GAMM
AAA-ATPase-like protein {ECO:0000313|EMBL:EIJ36299.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolJOral78_scaffold_51_23
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28833..30050)
DNA (1218bp) protein (406aa)
NnrS family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BP07_9GAMM rbh
NnrS family protein {ECO:0000313|EMBL:EIJ33100.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
NnrS family protein
DolJOral78_scaffold_51_24
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30064..30501)
DNA (438bp) protein (146aa)
AsnC family transcriptional regulator n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WZ05_9ALTE
AsnC family transcriptional regulator {ECO:0000313|EMBL:ENO16357.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Mar
DNA-binding transcriptional regulator (yjeB)
DolJOral78_scaffold_51_25
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30738..31154
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036907F1
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN49040.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" sourc
DolJOral78_scaffold_51_26
Sulfurospirillum deleyianum, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

31292..33184
DNA (1893bp) protein (631aa)
TonB-dependent receptor plug n=1 Tax=Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) RepID=D1B3A5_SULD5
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACZ12575.1}; TaxID=525898 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Su
DolJOral78_scaffold_51_27
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33184..34170
DNA (987bp) protein (329aa)
Periplasmic component of ABC-type transport system n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y362_9RHOO
periplasmic component of ABC-type transport system; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
periplasmic component of ABC-type transport system
DolJOral78_scaffold_51_28
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

34176..34949
DNA (774bp) protein (258aa)
ABC transporter, permease protein n=1 Tax=Arcobacter butzleri 7h1h RepID=S5P7H2_9PROT
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AGR78184.1}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Ar
DolJOral78_scaffold_51_29
RIFOXYD2_FULL_Sulfurimonas_34_21_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

34937..35695
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein n=1 Tax=Sulfurimonas sp. AST-10 RepID=T0L1S4_9HELI
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFOXYD2_FULL_Sulfurimonas_34_21_curated
ABC transporter-like protein
DolJOral78_scaffold_51_30
Sulfurimonas sp. AST-10, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

35688..36926
DNA (1239bp) protein (413aa)
Nitrite reductase n=1 Tax=Sulfurimonas sp. AST-10 RepID=T0JS52_9HELI
Nitrite reductase {ECO:0000313|EMBL:EQB39727.1}; TaxID=1172190 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas sp.
nitrite/nitric oxide reductase-related protein NnrS
Displaying items 1-30 of 128 in total

View Taxonomy