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DolJOral78_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 87 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_84_1
unknown

Not on your lists

comp(485..856)
DNA (372bp) protein (124aa)

This feature has no annotations

DolJOral78_scaffold_84_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(828..1385)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4S7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39230.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
DolJOral78_scaffold_84_3
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1903..2469
DNA (567bp) protein (189aa)
Resolvase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BE53_9RHOB
Resolvase {ECO:0000313|EMBL:EDZ45201.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
resolvase-like protein
DolJOral78_scaffold_84_trna_2
unknown

Not on your lists

comp(2668..2757)
DNA (90bp)
transferRNA
DolJOral78_scaffold_84_4
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3034..5487)
DNA (2454bp) protein (818aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F2F4_9CYAN rbh
Uncharacterized protein {ECO:0000313|EMBL:AFY65985.1}; Flags: Precursor;; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema s
hypothetical protein
DolJOral78_scaffold_84_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5497..6576)
DNA (1080bp) protein (360aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDN7_9BACT rbh
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:EEF62183.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivisi
ATPase
DolJOral78_scaffold_84_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6609..7730)
DNA (1122bp) protein (374aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NMN9_MARHT rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
DolJOral78_scaffold_84_7
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7730..8239)
DNA (510bp) protein (170aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NMP0_MARHT
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
DolJOral78_scaffold_84_8
unknown

Not on your lists

comp(8386..8610)
DNA (225bp) protein (75aa)

This feature has no annotations

DolJOral78_scaffold_84_9
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(8607..10145)
DNA (1539bp) protein (513aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IDA5_9CHLR rbh
Uncharacterized protein {ECO:0000313|EMBL:EFO80782.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscill
hypothetical protein rbh
DolJOral78_scaffold_84_10
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10132..11481)
DNA (1350bp) protein (450aa)
SWIM zinc finger domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VKU5_9CYAN rbh
SWIM zinc finger domain protein {ECO:0000313|EMBL:EDX77429.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthono
zinc finger SWIM domain-containing protein
DolJOral78_scaffold_84_11
unknown

Not on your lists

comp(11820..12269)
DNA (450bp) protein (150aa)

This feature has no annotations

DolJOral78_scaffold_84_12
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12368..13132
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKM5_ACCPU rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI00913.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein rbh
DolJOral78_scaffold_84_13
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14061..14369
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQZ7_DESPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG35227.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea ps
DolJOral78_scaffold_84_14
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14362..15417
DNA (1056bp) protein (352aa)
Related to hydrogenase expression/formation protein (HypE) n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQZ8_DESPS
hydrogenase expression/formation protein (HypE)
Related to hydrogenase expression/formation protein (HypE) {ECO:0000313|EMBL:CAG35226.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desu
DolJOral78_scaffold_84_15
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16119..17222
DNA (1104bp) protein (368aa)
CBS domain-containing protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H3N0_9GAMM rbh
hypothetical protein rbh
CBS domain-containing protein {ECO:0000313|EMBL:AGA92199.1}; Flags: Precursor;; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" sou
DolJOral78_scaffold_84_16
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17502..17927)
DNA (426bp) protein (142aa)
Putative DNA polymerase III subunit chi {ECO:0000313|EMBL:CDH43240.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDH43240.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacterace
Lipopolysaccharide export system permease n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DBH6_9GAMM
DNA polymerase III chi subunit HolC
DolJOral78_scaffold_84_17
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17944..19437)
DNA (1494bp) protein (498aa)
Probable cytosol aminopeptidase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLM9_9GAMM rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1400861 spec
leucyl aminopeptidase
DolJOral78_scaffold_84_18
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19611..20720
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z7M1_9GAMM
Putative Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:CDI00938.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="
permease
DolJOral78_scaffold_84_19
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20717..21781
DNA (1065bp) protein (355aa)
Permease YjgP/YjgQ family protein n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E8L8_9GAMM
Putative Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:CDI00937.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="
permease
DolJOral78_scaffold_84_20
unknown

Not on your lists

comp(22221..22604)
DNA (384bp) protein (128aa)

This feature has no annotations

DolJOral78_scaffold_84_21
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22852..23628)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AGQ7_GEOSK
Uncharacterized protein {ECO:0000313|EMBL:CDH47643.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
DolJOral78_scaffold_84_22
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23639..24316)
DNA (678bp) protein (226aa)
Response regulator TtrR n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DEN4_9GAMM
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:CDI03854.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;
two component system response regulator
DolJOral78_scaffold_84_23
unknown

Not on your lists

24407..24646
DNA (240bp) protein (80aa)

This feature has no annotations

DolJOral78_scaffold_84_24
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25139..26908
DNA (1770bp) protein (590aa)
Aspartate tRNA synthetase {ECO:0000313|EMBL:CDH44148.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CDH44148.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatu
Aspartate--tRNA ligase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G178_9GAMM
aspartyl-tRNA synthetase
DolJOral78_scaffold_84_25
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26961..27416
DNA (456bp) protein (152aa)
dATP pyrophosphohydrolase, MutT-like {ECO:0000313|EMBL:CDI01428.1}; EC=3.6.1.- {ECO:0000313|EMBL:CDI01428.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae;
NUDIX hydrolase n=1 Tax=Beggiatoa sp. PS RepID=A7C0J2_9GAMM
dATP pyrophosphohydrolase
DolJOral78_scaffold_84_26
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27477..28310
DNA (834bp) protein (278aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088330};; Ap4A hy
bis(5'nucleosyl)-tetraphosphatase ApaH (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=1 Tax=Thiocapsa marina 5811 RepID=F9U9I6_9GAMM rbh
DolJOral78_scaffold_84_27
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28307..28807
DNA (501bp) protein (167aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidat
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XFI2_METNJ
DolJOral78_scaffold_84_28
unknown

Not on your lists

comp(29129..30442)
DNA (1314bp) protein (438aa)

This feature has no annotations

DolJOral78_scaffold_84_29
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30513..31889)
DNA (1377bp) protein (459aa)
Crotonyl-CoA reductase n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V0Q5_ARCNC rbh
crotonyl-CoA reductase rbh
Crotonyl-CoA reductase {ECO:0000313|EMBL:ADG93867.1}; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter nit
Displaying items 1-30 of 87 in total

View Taxonomy