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DolJOral78_scaffold_85

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Displaying items 1-30 of 196 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_85_1
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37..1374)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KA76_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH01029.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
DolJOral78_scaffold_85_2
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1615..1941)
DNA (327bp) protein (109aa)
UPF0310 protein Mycch_0063 n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BC84_MYCCN
Protein of unknown function DUF55
UPF0310 protein Mycch_0063 {ECO:0000256|HAMAP-Rule:MF_00771}; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (str
DolJOral78_scaffold_85_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1938..2330)
DNA (393bp) protein (131aa)
Rhodanese domain protein id=4892308 bin=GWC2_Bacteroidetes_40_13 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Rhodanese-related sulfurtransferase Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
DolJOral78_scaffold_85_4
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2394..3248)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KCA7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE84252.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensi
hypothetical protein
DolJOral78_scaffold_85_5
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3252..3473)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2K919_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKE84253.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensi
DolJOral78_scaffold_85_6
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4085..5302)
DNA (1218bp) protein (406aa)
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:EAR61768.1}; EC=4.2.99.- {ECO:0000313|EMBL:EAR61768.1};; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Ne
O-succinylhomoserine sulfhydrylase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMM9_NEPCE rbh
methionine gamma-lyase
DolJOral78_scaffold_85_7
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5317..6837)
DNA (1521bp) protein (507aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN0_NEPCE rbh
DolJOral78_scaffold_85_8
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6870..7367)
DNA (498bp) protein (166aa)
CvpA family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN1_NEPCE
CvpA family protein {ECO:0000313|EMBL:EAR61766.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
putative colicin V production membrane protein
DolJOral78_scaffold_85_9
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7431..7994)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN2_NEPCE
Uncharacterized protein {ECO:0000313|EMBL:EAR61765.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
Sporulation related
DolJOral78_scaffold_85_10
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7995..9218)
DNA (1224bp) protein (408aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12)
Folylpolyglutamate synthase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN3_NEPCE rbh
Folylpolyglutamate synthase {ECO:0000313|EMBL:EAR61764.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis
DolJOral78_scaffold_85_11
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9352..10284)
DNA (933bp) protein (311aa)
accD; acetyl-CoA carboxylase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN4_NEPCE rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
DolJOral78_scaffold_85_12
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10307..11110)
DNA (804bp) protein (268aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=207954 species="B
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20) rbh
Tryptophan synthase alpha chain n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN5_NEPCE rbh
DolJOral78_scaffold_85_13
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11130..12350)
DNA (1221bp) protein (407aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN6_NEPCE rbh
DolJOral78_scaffold_85_14
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12340..12912)
DNA (573bp) protein (191aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN7_NEPCE rbh
DolJOral78_scaffold_85_15
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13032..13883)
DNA (852bp) protein (284aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN8_NEPCE rbh
DolJOral78_scaffold_85_16
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13885..16983)
DNA (3099bp) protein (1033aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMN9_NEPCE rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR61758.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
FimV N-terminal domain-containing protein
DolJOral78_scaffold_85_17
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17126..18148)
DNA (1023bp) protein (341aa)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP0_NEPCE rbh
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:M
aspartate-semialdehyde dehydrogenase
DolJOral78_scaffold_85_18
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18219..19334)
DNA (1116bp) protein (372aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP1_NEPCE rbh
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:M
DolJOral78_scaffold_85_19
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19453..20532)
DNA (1080bp) protein (360aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP2_NEPCE rbh
DolJOral78_scaffold_85_20
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20645..21292)
DNA (648bp) protein (216aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP3_NEPCE rbh
DolJOral78_scaffold_85_21
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21311..22729)
DNA (1419bp) protein (473aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP4_NEPCE rbh
DolJOral78_scaffold_85_22
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22903..23814
DNA (912bp) protein (304aa)
Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP5_NEPCE rbh
Regulatory protein, LysR:LysR, substrate-binding {ECO:0000313|EMBL:EAR61752.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptun
LysR family transcriptional regulator
DolJOral78_scaffold_85_23
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23881..24873
DNA (993bp) protein (331aa)
Putative poly(Hydroxyalcanoate) granule associated protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP6_NEPCE rbh
Putative poly(Hydroxyalcanoate) granule associated protein {ECO:0000313|EMBL:EAR61751.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" sour
hypothetical protein
DolJOral78_scaffold_85_24
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24870..25934
DNA (1065bp) protein (355aa)
Poly(3-hydroxyalkanoate) synthase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP7_NEPCE rbh
Poly(3-hydroxyalkanoate) synthase {ECO:0000313|EMBL:EAR61750.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesar
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
DolJOral78_scaffold_85_25
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26030..26179
DNA (150bp) protein (50aa)
transposase IS5 n=1 Tax=Amphritea japonica RepID=UPI000364DD16
Mobile element protein {ECO:0000313|EMBL:KEA61756.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacteriu
DolJOral78_scaffold_85_26
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26294..27106
DNA (813bp) protein (271aa)
speD; S-adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMP8_NEPCE rbh
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF
DolJOral78_scaffold_85_27
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27337..27672)
DNA (336bp) protein (112aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGD6_NEPCE
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:EAR59524.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Nep
yfiA; ribosomal subunit interface protein
DolJOral78_scaffold_85_28
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27905..28762)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000364F4F6 rbh
Integral membrane protein {ECO:0000313|EMBL:KEA63894.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacte
permease
DolJOral78_scaffold_85_29
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29084..32005)
DNA (2922bp) protein (974aa)
Peptidase M16-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGH1_NEPCE rbh
Peptidase M16-like {ECO:0000313|EMBL:EAR59538.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
peptidase M16C associated domain-containing protein
DolJOral78_scaffold_85_30
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32359..32931
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGH0_NEPCE
Uncharacterized protein {ECO:0000313|EMBL:EAR59539.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
hypothetical protein
Displaying items 1-30 of 196 in total

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