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DolJOral78_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_136_1
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1..705)
DNA (705bp) protein (235aa)
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:AKB16571.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AKB16571.1};; TaxID=1434121 species="Archaea; Euryarchaeota; Methan
Type I restriction-modification system, DNA-methyltransferase subunit M (EC:2.1.1.72)
Restriction-modification system type I methyltransferase subunit (DNA-adenine methylase ). Coupling with next gene n=1 Tax=Arthrospira sp. PCC 8005 RepID=H1WAF5_9CYAN
DolJOral78_scaffold_136_2
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(874..3006)
DNA (2133bp) protein (711aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae
UvrD/REP helicase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LRP0_DESBD rbh
UvrD/REP helicase
DolJOral78_scaffold_136_3
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3148..4197)
DNA (1050bp) protein (350aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JUH1_DESFR rbh
DolJOral78_scaffold_136_trna_3
unknown

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comp(4441..4513)
DNA (73bp)
transferRNA
DolJOral78_scaffold_136_4
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4571..5623)
DNA (1053bp) protein (351aa)
Radical SAM domain protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X1J8_DESRD rbh
radical SAM protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
DolJOral78_scaffold_136_5
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5650..6453)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TFH0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR35496.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovi
hypothetical protein
DolJOral78_scaffold_136_6
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6610..6867
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:ACU90879.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfo
DolJOral78_scaffold_136_7
unknown

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6845..7105
DNA (261bp) protein (87aa)

This feature has no annotations

DolJOral78_scaffold_136_8
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7105..8358
DNA (1254bp) protein (418aa)
Diguanylate phosphodiesterase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LWZ4_DESBD rbh
diguanylate phosphodiesterase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ACU91204.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="D
DolJOral78_scaffold_136_9
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(8432..12316)
DNA (3885bp) protein (1295aa)
transglutaminase domain-containing protein Tax=CG_Arma_01
Transglutaminase domain protein id=3190436 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
hypothetical protein
DolJOral78_scaffold_136_10
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12391..13152)
DNA (762bp) protein (254aa)
Methyltransferase small n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X0Q8_DESRD
methyltransferase small
Methyltransferase small {ECO:0000313|EMBL:ACV68005.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfoha
DolJOral78_scaffold_136_11
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13188..14729)
DNA (1542bp) protein (514aa)
Integral membrane protein MviN n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SSJ2_9DELT rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" sou
integral membrane protein MviN rbh
DolJOral78_scaffold_136_12
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14957..17407)
DNA (2451bp) protein (817aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LTA4_DESBD rbh
Tax=BJP_08E140C01_Desulfomicrobium_58_14
DolJOral78_scaffold_136_13
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17458..18567)
DNA (1110bp) protein (370aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SNY8_9DELT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrio
clpX; ATP-dependent protease ATP-binding subunit ClpX
DolJOral78_scaffold_136_14
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18715..19323)
DNA (609bp) protein (203aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X0I3_DESRD rbh
DolJOral78_scaffold_136_15
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19601..20947)
DNA (1347bp) protein (449aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=525897 spe
Trigger factor n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LTA1_DESBD
trigger factor
DolJOral78_scaffold_136_trna_2
unknown

Not on your lists

comp(21017..21096)
DNA (80bp)
transferRNA
DolJOral78_scaffold_136_16
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21138..21953)
DNA (816bp) protein (272aa)
Phosphomethylpyrimidine kinase n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RD57_9DELT rbh
Phosphomethylpyrimidine kinase
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CCO24689.1}; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="De
DolJOral78_scaffold_136_17
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21995..23167)
DNA (1173bp) protein (391aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SMQ8_9DELT rbh
DolJOral78_scaffold_136_18
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23173..24186)
DNA (1014bp) protein (338aa)
GTPase Obg n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TFA0_9DELT rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desul
GTPase CgtA
DolJOral78_scaffold_136_19
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24417..24686)
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=1 Tax=Desulfovibrio longus RepID=UPI0003B3F730
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000255|HAMAP-Rule:MF_00539}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfo
DolJOral78_scaffold_136_20
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24878..25189)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQ07_DESBD
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae
DolJOral78_scaffold_136_21
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25334..26074)
DNA (741bp) protein (247aa)
Phosphoribosyltransferase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z362_DESAF
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:EGJ50306.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfov
DolJOral78_scaffold_136_22
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26071..26712)
DNA (642bp) protein (214aa)
NADPH-dependent FMN reductase n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q1U3_DESAF
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EMG36853.1}; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Des
NADPH-dependent FMN reductase
DolJOral78_scaffold_136_23
unknown

Not on your lists

26807..27082
DNA (276bp) protein (92aa)

This feature has no annotations

DolJOral78_scaffold_136_24
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26957..27592)
DNA (636bp) protein (212aa)
Beta-lactamase domain protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQ03_DESBD
beta-lactamase domain-containing protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
DolJOral78_scaffold_136_25
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28007..30400
DNA (2394bp) protein (798aa)
Diguanylate cyclase with TPR repeats n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQ02_DESBD rbh
diguanylate cyclase with TPR repeats
Tax=BJP_08E140C01_Desulfomicrobium_58_14
DolJOral78_scaffold_136_trna_1
unknown

Not on your lists

30496..30568
DNA (73bp)
transferRNA
DolJOral78_scaffold_136_26
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30775..32085)
DNA (1311bp) protein (437aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=525897 species="Bacteria;
Phenylacetate--CoA ligase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LWN4_DESBD rbh
DolJOral78_scaffold_136_27
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32121..33452)
DNA (1332bp) protein (444aa)
Replicative DNA helicase n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X262_DESRD rbh
replicative DNA helicase rbh
Replicative DNA helicase {ECO:0000313|EMBL:ACV68385.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfoh
Displaying items 1-30 of 97 in total

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