ggKbase home page

DolJOral78_scaffold_345

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_345_1
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..116
DNA (114bp) protein (38aa)
Transposase IS200-family protein {ECO:0000313|EMBL:AFK85149.1}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Ther
DolJOral78_scaffold_345_2
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179..1378)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RF41_DESPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW18132.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
DolJOral78_scaffold_345_3
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1385..2497)
DNA (1113bp) protein (371aa)
Band 7 protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RF42_DESPD
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:ADW18133.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionic
DolJOral78_scaffold_345_4
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2615..3436)
DNA (822bp) protein (274aa)
PhoT family phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter ATP-binding protein, PhoT family n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RCK4_DESPD rbh
DolJOral78_scaffold_345_5
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3551..4585)
DNA (1035bp) protein (345aa)
Phosphate ABC transporter substrate-binding protein, PhoT family n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PLY5_DESSD rbh
phosphate ABC transporter substrate-binding protein, PhoT family
Phosphate ABC transporter substrate-binding protein, PhoT family {ECO:0000313|EMBL:AGF77461.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacteral
DolJOral78_scaffold_345_6
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4689..5963)
DNA (1275bp) protein (425aa)
Phosphate ABC transporter membrane protein 2, PhoT family n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6Z4_DESSD rbh
phosphate ABC transporter membrane protein 2, PhoT family rbh
Phosphate ABC transporter membrane protein 2, PhoT family {ECO:0000313|EMBL:AGF77462.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desu
DolJOral78_scaffold_345_7
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6002..7378)
DNA (1377bp) protein (459aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P1V2_DESSD rbh
phosphate ABC transporter membrane protein 1, PhoT family
Phosphate ABC transporter membrane protein 1, PhoT family {ECO:0000313|EMBL:AGF77463.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Des
DolJOral78_scaffold_345_8
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7702..8838
DNA (1137bp) protein (379aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase {ECO:0000313|EMBL:ADW16788.1}; EC=2.7.1.11 {ECO:0000313|EMBL:ADW16788.1};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbacea
6-phosphofructokinase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RCK0_DESPD
DolJOral78_scaffold_345_9
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8960..9619)
DNA (660bp) protein (220aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHA4_DESPD
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; De
DolJOral78_scaffold_345_10
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9878..10603
DNA (726bp) protein (242aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHA3_DESPD rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADW19463.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; De
DolJOral78_scaffold_345_11
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10643..12451
DNA (1809bp) protein (603aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae
Multi-sensor signal transduction histidine kinase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHA2_DESPD rbh
multi-sensor signal transduction histidine kinase
DolJOral78_scaffold_345_12
unknown

Not on your lists

comp(12788..13105)
DNA (318bp) protein (106aa)

This feature has no annotations

DolJOral78_scaffold_345_13
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13149..14636
DNA (1488bp) protein (496aa)
Glycosyl transferase, family 4 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNJ8_SYNFM rbh
glycosyl transferase family protein
Glycosyl transferase, family 4 {ECO:0000313|EMBL:ABK19000.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source=
DolJOral78_scaffold_345_14
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14626..17058
DNA (2433bp) protein (811aa)
O-antigen polymerase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F828_9DELT
O-antigen polymerase {ECO:0000313|EMBL:KJU87772.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavari
DolJOral78_scaffold_345_15
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17568..18674
DNA (1107bp) protein (369aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1629713 species="Bacte
GDP-mannose 4,6-dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003744ED4 rbh
GDP-mannose 4,6-dehydratase
DolJOral78_scaffold_345_16
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18686..19660
DNA (975bp) protein (325aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=88274 species="Bacteri
GDP-mannose 4,6-dehydratase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FA44_9DELT rbh
NAD-dependent epimerase/dehydratase
DolJOral78_scaffold_345_17
Aneurinibacillus thermoaerophilus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19662..20468
DNA (807bp) protein (269aa)
ABC-transporter protein n=1 Tax=Aneurinibacillus thermoaerophilus RepID=Q6T1X5_ANETH rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=143495 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneur
wzm; protein Wzm
DolJOral78_scaffold_345_18
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20465..21703
DNA (1239bp) protein (413aa)
ATP-binding protein n=1 Tax=Aneurinibacillus thermoaerophilus RepID=Q6T1X4_ANETH
ABC transporter-like protein; K09691 lipopolysaccharide transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_49_15_curated
ABC transporter-like protein
DolJOral78_scaffold_345_19
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

21696..22988
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00031CAC25
Methylase {ECO:0000313|EMBL:KIJ75150.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
type 11 methyltransferase
DolJOral78_scaffold_345_20
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22985..25294
DNA (2310bp) protein (770aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002FBD4B7 rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:KIF17666.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
group 1 glycosyl transferase
DolJOral78_scaffold_345_21
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25294..28485
DNA (3192bp) protein (1064aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QLK2_DESB2 rbh
Contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIX14754.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
hypothetical protein
DolJOral78_scaffold_345_22
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28454..30127
DNA (1674bp) protein (558aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:CDO59202.1}; EC=1.1.5.3 {ECO:0000313|EMBL:CDO59202.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarin
FAD dependent oxidoreductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTQ7_PARL1
FAD dependent oxidoreductase
DolJOral78_scaffold_345_23
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30135..31328
DNA (1194bp) protein (398aa)
Glycosyl transferase group 1 n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QEK2_DESB2
group 1 glycosyl transferase Tax=RBG_13_Deltaproteobacteria_43_22_curated
group 1 glycosyl transferase
DolJOral78_scaffold_345_24
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31508..33322
DNA (1815bp) protein (605aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=GWB2_Desulfobacterales_56_26_curated
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase id=2081636 bin=GWB2_Desulfobacterales_56_26 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolJOral78_scaffold_345_25
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33347..34330
DNA (984bp) protein (328aa)
NAD-dependent epimerase/dehydratase id=2081635 bin=GWB2_Desulfobacterales_56_26 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
NAD-dependent epimerase/dehydratase Tax=GWB2_Desulfobacterales_56_26_curated
NAD-dependent epimerase/dehydratase rbh
DolJOral78_scaffold_345_26
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34331..35068
DNA (738bp) protein (246aa)
acetyltransferase Tax=GWB2_Desulfobacterales_56_26_curated
Acetyltransferase (Isoleucine patch superfamily) id=2081634 bin=GWB2_Desulfobacterales_56_26 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
acetyltransferase
DolJOral78_scaffold_345_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

35065..36048
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72307.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
Uncharacterized protein id=4628284 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
membrane protein
DolJOral78_scaffold_345_28
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36055..38148
DNA (2094bp) protein (698aa)
WD40 domain protein beta Propeller n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QLJ4_DESB2
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
DolJOral78_scaffold_345_29
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38102..39112
DNA (1011bp) protein (337aa)
Glycosyl transferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PBL9_DESSD
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGF79017.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulf
DolJOral78_scaffold_345_30

Not on your lists

39162..39932
DNA (771bp) protein (257aa)
Lipolytic enzyme, G-D-S-L (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZF14_9BACT
Lipolytic enzyme, G-D-S-L {ECO:0000313|EMBL:EKD36499.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 55 in total

View Taxonomy