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DolJOral78_scaffold_348

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Displaying items 1-30 of 92 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_348_1
Vibrio maritimus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..137
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL17429.1}; TaxID=990268 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio maritimus.;"
DolJOral78_scaffold_348_2
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134..349
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Vibrio crassostreae RepID=UPI0003184DCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW16441.1}; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
DolJOral78_scaffold_348_3
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

449..1528
DNA (1080bp) protein (360aa)
GGDEF domain protein n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QEB4_GLANF
diguanylate cyclase
GGDEF domain protein {ECO:0000313|EMBL:AEP31388.1}; TaxID=1085623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola nitratired
DolJOral78_scaffold_348_4

Not on your lists

2147..2518
DNA (372bp) protein (124aa)
Integrase catalytic region n=1 Tax=Geobacter sp. (strain M18) RepID=E8WSF2_GEOS8
integrase catalytic subunit
Uncharacterized protein {ECO:0000313|EMBL:KKL66305.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DolJOral78_scaffold_348_5
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2744..3235)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RE79_DESPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW19116.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
DolJOral78_scaffold_348_6
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3390..4283
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RE80_DESPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW19117.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
DolJOral78_scaffold_348_7
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4457..5572
DNA (1116bp) protein (372aa)
Putative permease n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P917_DESSD
putative permease
Putative permease {ECO:0000313|EMBL:AGF78157.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexi
DolJOral78_scaffold_348_8
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5650..9462)
DNA (3813bp) protein (1271aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBH0_DESPD rbh
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule
DolJOral78_scaffold_348_9
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9962..10684)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SBZ3_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC31831.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strai
DolJOral78_scaffold_348_10
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(10832..11779)
DNA (948bp) protein (316aa)
Redox-sensitive transcriptional activator n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X4I2_BACMS
oxyR; redox-sensitive transcriptional activator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
oxyR; redox-sensitive transcriptional activator
DolJOral78_scaffold_348_11
Bacteriovorax sp. Seq25_V, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11789..13342)
DNA (1554bp) protein (518aa)
Alkyl hydroperoxide reductase, F subunit {ECO:0000313|EMBL:EQC44016.1}; EC=1.8.1.- {ECO:0000313|EMBL:EQC44016.1};; TaxID=1201288 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrional
Alkyl hydroperoxide reductase, F subunit n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0RB05_9DELT
ahpF; alkyl hydroperoxide reductase subunit F
DolJOral78_scaffold_348_12
Bacteriovorax sp. BAL6_X, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13444..14010)
DNA (567bp) protein (189aa)
Peroxiredoxin {ECO:0000313|EMBL:EPZ50095.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EPZ50095.1};; TaxID=1201290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; B
ahpC; alkyl hydroperoxide reductase (EC:1.8.1.-)
Peroxiredoxin n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0CCC6_9DELT
DolJOral78_scaffold_348_13
unknown

Not on your lists

14058..14252
DNA (195bp) protein (65aa)

This feature has no annotations

DolJOral78_scaffold_348_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14212..15738)
DNA (1527bp) protein (509aa)
Radical SAM domain iron-sulfur cluster-binding oxidoreductase n=2 Tax=Geobacter metallireducens RepID=Q39Z34_GEOMG rbh
radical SAM family protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
DolJOral78_scaffold_348_15
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15787..17373)
DNA (1587bp) protein (529aa)
Peptide chain release factor 3 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBH4_DESPD
peptide chain release factor 3 (bRF-3)
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=577650 species="Bacteria; Proteobacteria; Deltapro
DolJOral78_scaffold_348_16
unknown

Not on your lists

17438..17872
DNA (435bp) protein (145aa)

This feature has no annotations

DolJOral78_scaffold_348_17
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17980..18450
DNA (471bp) protein (157aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P3E4_DESSD
putative hydrolase or acyltransferase of alpha/beta superfamily
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AGF77973.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae
DolJOral78_scaffold_348_18
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18546..19472)
DNA (927bp) protein (309aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBH8_DESPD
ribosomal L11 methyltransferase
DolJOral78_scaffold_348_19
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19765..20016
DNA (252bp) protein (84aa)
Antitoxin n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IIL0_9DELT
Antitoxin {ECO:0000313|EMBL:ESQ09802.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;" source="uncu
antitoxin of toxin-antitoxin stability system
DolJOral78_scaffold_348_20
unknown

Not on your lists

comp(20358..20735)
DNA (378bp) protein (126aa)

This feature has no annotations

DolJOral78_scaffold_348_21
unknown

Not on your lists

comp(20812..21072)
DNA (261bp) protein (87aa)

This feature has no annotations

DolJOral78_scaffold_348_22
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21292..21867
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBH9_DESPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW16688.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
DolJOral78_scaffold_348_23
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21840..23213
DNA (1374bp) protein (458aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:ADW16689.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ADW16689.1};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desu
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBI0_DESPD
DolJOral78_scaffold_348_24
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23260..24717)
DNA (1458bp) protein (486aa)
RNA polymerase sigma-54 factor n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBI2_DESPD rbh
RNA polymerase sigma 54 subunit RpoN
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desul
DolJOral78_scaffold_348_25
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24765..25496)
DNA (732bp) protein (244aa)
ABC transporter related protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBI3_DESPD
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADW16692.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulf
DolJOral78_scaffold_348_26
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25493..26017)
DNA (525bp) protein (175aa)
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBI4_DESPD
lipopolysaccharide transport periplasmic protein LptA
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:ADW16693.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobu
DolJOral78_scaffold_348_27
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26268..27152
DNA (885bp) protein (295aa)
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotra
Acetylglutamate kinase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBI5_DESPD rbh
DolJOral78_scaffold_348_28
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27149..28363
DNA (1215bp) protein (405aa)
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=577650 species="Bacteria; Prot
Acetylornithine aminotransferase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBI6_DESPD rbh
DolJOral78_scaffold_348_29
unknown

Not on your lists

28588..28806
DNA (219bp) protein (73aa)

This feature has no annotations

DolJOral78_scaffold_348_30
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28852..29787
DNA (936bp) protein (312aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=577650 species="Bacte
Ornithine carbamoyltransferase, catabolic n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBI8_DESPD
Displaying items 1-30 of 92 in total

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