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DolJOral78_scaffold_449

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_449_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..360
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036AB730
AAA-ATPase-like protein {ECO:0000313|EMBL:EIJ36591.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolJOral78_scaffold_449_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(382..975)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000365BF7B
Ankyrin {ECO:0000313|EMBL:EIJ37008.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5
EHMT2; euchromatic histone-lysine N-methyltransferase 2
DolJOral78_scaffold_449_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1267..1707
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036B98B9
RDD domain-containing protein
RDD domain containing protein {ECO:0000313|EMBL:ADE16073.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" sourc
DolJOral78_scaffold_449_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1785..3275
DNA (1491bp) protein (497aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPX8_9GAMM rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Flags: Precursor;;
DolJOral78_scaffold_449_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3300..3722
DNA (423bp) protein (141aa)
DNA polymerase III, chi subunit {ECO:0000313|EMBL:EIJ33422.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIJ33422.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotricha
DNA polymerase III, chi subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPX9_9GAMM
DNA polymerase III chi subunit HolC
DolJOral78_scaffold_449_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3797..4123
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036CE000
Uncharacterized protein {ECO:0000313|EMBL:EIJ33423.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DolJOral78_scaffold_449_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4158..6998
DNA (2841bp) protein (947aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000365D529 rbh
valS; valyl-tRNA synthetase
DolJOral78_scaffold_449_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7203..8231)
DNA (1029bp) protein (343aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EIJ32807.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIJ32807.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotric
DNA-directed DNA polymerase (EC:2.7.7.7)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037F24EE rbh
DolJOral78_scaffold_449_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8408..8947
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWZ2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ35885.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
DolJOral78_scaffold_449_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9018..10016
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003798FDE rbh
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:EIJ33677.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thi
alpha/beta hydrolase fold protein
DolJOral78_scaffold_449_11
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9984..10982)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Photobacterium sp. AK15 RepID=L8J6J6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ELR64396.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK1
hypothetical protein
DolJOral78_scaffold_449_12
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11190..12572)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Photobacterium sp. AK15 RepID=L8J6C1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ELR64395.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK1
hypothetical protein
DolJOral78_scaffold_449_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13606..14502)
DNA (897bp) protein (299aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thi
cysteine synthase n=1 Tax=Thiothrix disciformis RepID=UPI000373A287 rbh
cysteine synthase B
DolJOral78_scaffold_449_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14506..14895)
DNA (390bp) protein (130aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
holo-acyl-carrier-protein synthase (EC:2.7.8.7)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037613EC
DolJOral78_scaffold_449_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14892..15596)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00038162E9
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=870187 species="Bacteria; Proteobacteria; Gam
DNA recombination and repair protein RecO
DolJOral78_scaffold_449_16
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15679..18357)
DNA (2679bp) protein (893aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Leucothrix mucor RepID=UPI0003B77E9F
C4 dicarboxylatetransporter permease {ECO:0000313|EMBL:EPJ55462.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="
TRAP-type mannitol/chloroaromatic compound transport system, large permease component
DolJOral78_scaffold_449_17
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18357..19412)
DNA (1056bp) protein (352aa)
permease n=1 Tax=Leucothrix mucor RepID=UPI0003B692F1
Uncharacterized protein {ECO:0000313|EMBL:EPJ55463.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
permease
DolJOral78_scaffold_449_18
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19545..20642)
DNA (1098bp) protein (366aa)
C4-dicarboxylate ABC transporter n=1 Tax=Leucothrix mucor RepID=UPI0003B5EF58
Bacterial extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:EPJ48547.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospir
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
DolJOral78_scaffold_449_19
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20820..24566)
DNA (3747bp) protein (1249aa)
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12) rbh
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036AF58E rbh
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EWY40536.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospi
DolJOral78_scaffold_449_20
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24918..25739)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B2FBD8
protein of unknown function DUF980
Uncharacterized protein {ECO:0000313|EMBL:AIY41064.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
DolJOral78_scaffold_449_21
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25906..26751
DNA (846bp) protein (282aa)
folD; methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5 3.5.4.9)
5,10-methylene-tetrahydrofolate dehydrogenase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B711A7
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
DolJOral78_scaffold_449_22
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26843..28024
DNA (1182bp) protein (394aa)
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:KEA63987.1}; EC=2.3.1.16 {ECO:0000313|EMBL:KEA63987.1};; EC=2.3.1.9 {ECO:0000313|EMBL:KEA63987.1};; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaprot
acetyl-CoA acetyltransferase (EC:2.3.1.9)
3-ketoacyl-CoA thiolase n=1 Tax=Leucothrix mucor RepID=UPI0003B73E5B
DolJOral78_scaffold_449_23
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28366..28740
DNA (375bp) protein (125aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNM3_9GAMM
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EIJ32966.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source=
DolJOral78_scaffold_449_24
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28760..29140
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00035F2CB0
succinate dehydrogenase
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:EKE71540.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; O
DolJOral78_scaffold_449_25
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29151..30938
DNA (1788bp) protein (596aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotric
fumarate reductase (EC:1.3.99.1)
succinate dehydrogenase n=1 Tax=Thiothrix flexilis RepID=UPI00037C5DBB rbh
DolJOral78_scaffold_449_26
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30951..31730
DNA (780bp) protein (260aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrich
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1)
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Thiothrix disciformis RepID=UPI000373C5A5
DolJOral78_scaffold_449_27
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31804..32037
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037581B2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32970.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DolJOral78_scaffold_449_28
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32061..32486
DNA (426bp) protein (142aa)
Thiosulfate sulfurtransferase {ECO:0000313|EMBL:EIJ32972.1}; EC=2.8.1.1 {ECO:0000313|EMBL:EIJ32972.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichace
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000380255D
rhodanese domain-containing protein
DolJOral78_scaffold_449_29
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(32689..34518)
DNA (1830bp) protein (610aa)
NERD domain protein n=1 Tax=Arthrospira platensis C1 RepID=K1W4J9_ARTPT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIJ74133.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
DolJOral78_scaffold_449_30
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34529..35425)
DNA (897bp) protein (299aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;"
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00037CBF85
superfamily I DNA/RNA helicase-like protein
Displaying items 1-30 of 55 in total

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