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DolJOral78_scaffold_497

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_497_1
ACD3, Gracilibacteria, Bacteria

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2..2563
DNA (2562bp) protein (854aa)
UvrABC system protein A n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FDF8_9BACT rbh
gwc:GWCH70_2991 uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=ACD3
uvrA; UvrABC system protein A
DolJOral78_scaffold_497_2
ACD49, Gracilibacteria, Bacteria

Not on your lists

2568..3446
DNA (879bp) protein (293aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] id=69641 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=ACD49
UDP-N-acetylenolpyruvoylglucosamine reductase
DolJOral78_scaffold_497_3
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

3421..4200
DNA (780bp) protein (260aa)
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=CG_GN02-01
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GFR7_9BACT rbh
tRNA pseudouridine synthase A
DolJOral78_scaffold_497_4
unknown

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comp(4197..4868)
DNA (672bp) protein (224aa)

This feature has no annotations

DolJOral78_scaffold_497_5
unknown

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4935..5324
DNA (390bp) protein (130aa)

This feature has no annotations

DolJOral78_scaffold_497_6
ACD78, Gracilibacteria, Bacteria

Not on your lists

5365..7989
DNA (2625bp) protein (875aa)
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] Tax=ACD78
ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
DolJOral78_scaffold_497_7
unknown

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8098..8964
DNA (867bp) protein (289aa)

This feature has no annotations

DolJOral78_scaffold_497_8
unknown

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8967..10385
DNA (1419bp) protein (473aa)

This feature has no annotations

DolJOral78_scaffold_497_9
ACD78, Gracilibacteria, Bacteria

Not on your lists

10392..11654
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BW95_9BACT rbh
pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); K02454 general secretion pathway protein E Tax=ACD78
hypothetical protein
DolJOral78_scaffold_497_10

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11681..12778
DNA (1098bp) protein (366aa)
type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=69473 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66533.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
type II secretion system F domain-containing protein
DolJOral78_scaffold_497_11
unknown

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13309..17133
DNA (3825bp) protein (1275aa)
Putative cellulosomal anchoring scaffoldin B n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSL3_9FIRM id=69644 bin=ACD49 species=Peptoniphilus lacrimalis genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Putative cellulosomal anchoring scaffoldin B n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSL3_9FIRM Tax=ACD49
srpA; platelet-binding glycoprotein
DolJOral78_scaffold_497_12
ACD49, ACD49, ACD49, ACD49, Gracilibacteria, Bacteria

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comp(17229..17798)
DNA (570bp) protein (190aa)
Actin-like ATPase domain id=69116 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Actin-like ATPase domain id=69116 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DolJOral78_scaffold_497_13
ACD4, Gracilibacteria, Bacteria

Not on your lists

17919..21038
DNA (3120bp) protein (1040aa)
cpf:CPF_2807 mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.1.-] Tax=ACD4
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5Z2_9BACT rbh
transcription-repair coupling factor
DolJOral78_scaffold_497_14
ACD49, Gracilibacteria, Bacteria

Not on your lists

21104..21997
DNA (894bp) protein (298aa)
hypothetical protein; K09811 cell division transport system permease protein id=69454 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein; K09811 cell division transport system permease protein Tax=ACD49
DolJOral78_scaffold_497_15
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

22008..24392
DNA (2385bp) protein (795aa)
Alpha-L-glutamate ligase {ECO:0000313|EMBL:KKR07957.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
alpha-L-glutamate ligase id=5093626 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria) rbh
alpha-L-glutamate ligase
DolJOral78_scaffold_497_trna_1
unknown

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24507..24582
DNA (76bp)
transferRNA
DolJOral78_scaffold_497_trna_2
unknown

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24613..24686
DNA (74bp)
transferRNA
DolJOral78_scaffold_497_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

24760..24969
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVT9_9BACT
seg 54..63 Tax=CG_GN02-01
DolJOral78_scaffold_497_17

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25134..26324
DNA (1191bp) protein (397aa)
Elongation factor Tu n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FW87_9BACT rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1234023 species="Bacteria; environmental samples.;" source=
Translation elongation factor Tu
DolJOral78_scaffold_497_18

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26418..26738
DNA (321bp) protein (107aa)
ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=51150 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rpsJ; 30S ribosomal protein S10
DolJOral78_scaffold_497_19

Not on your lists


26803..27000
DNA (198bp) protein (66aa)
50S ribosomal protein L28 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AV64_9BACT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rpmB; ribosomal protein L28
DolJOral78_scaffold_497_trna_3
unknown

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27037..27119
DNA (83bp)
transferRNA
DolJOral78_scaffold_497_20

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27222..27461
DNA (240bp) protein (80aa)
30S ribosomal protein S16P n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GGF9_9BACT
30S ribosomal protein S16P; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
SSU ribosomal protein s16p; K02959 small subunit ribosomal protein S16
DolJOral78_scaffold_497_21
ACD2, ACD2, ACD2, ACD2, Gracilibacteria, Bacteria

Not on your lists

27487..27723
DNA (237bp) protein (79aa)
hypothetical protein; K06960 id=34454 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein; K06960 id=34454 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
DolJOral78_scaffold_497_22
ACD78, Gracilibacteria, Bacteria

Not on your lists

27736..28200
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FW89_9BACT
transmembrane_regions 23..45 Tax=ACD78
DolJOral78_scaffold_497_23

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comp(28236..28649)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZJV3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44673.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DolJOral78_scaffold_497_24
ACD2, ACD2, ACD2, ACD2, Gracilibacteria, Bacteria

Not on your lists

28719..30005
DNA (1287bp) protein (429aa)
coiled-coil 433..454 id=33990 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
coiled-coil 433..454 id=33990 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DolJOral78_scaffold_497_25
ACD4, Gracilibacteria, Bacteria

Not on your lists

30010..32058
DNA (2049bp) protein (683aa)
TPR repeat-containing adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] Tax=ACD4
adenylate/guanylate cyclase (EC:4.6.1.1)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GVH0_9BACT rbh
DolJOral78_scaffold_497_26
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

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comp(32068..33141)
DNA (1074bp) protein (358aa)
Putative DNA recombination protein Tax=GWC2_OD1_37_14
Putative DNA recombination protein id=4242140 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
DolJOral78_scaffold_497_27
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(33252..33947)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FU86_9BACT
seg 169..182 Tax=ACD49
Displaying items 1-30 of 59 in total

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