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DolJOral78_scaffold_593

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_593_1
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(2..1327)
DNA (1326bp) protein (442aa)
AAA-ATPase n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TK99_CALNY
AAA-ATPase
AAA-ATPase {ECO:0000313|EMBL:ADR19971.1}; TaxID=768670 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;" source="Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 1012
DolJOral78_scaffold_593_2
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(1357..2655)
DNA (1299bp) protein (433aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22) Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
Nucleotide sugar dehydrogenase n=1 Tax=Treponema pedis str. T A4 RepID=S6A7U7_9SPIO rbh
UDP-N-acetyl-D-glucosamine dehydrogenase
DolJOral78_scaffold_593_3
Treponema pedis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2672..3730)
DNA (1059bp) protein (353aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AGT42703.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AGT42703.1};; TaxID=1291379 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Treponema pedis str. T A4 RepID=S5ZXH3_9SPIO rbh
DolJOral78_scaffold_593_4
Spirochaeta sp. JC230, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3727..4293)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Treponema medium ATCC 700293 RepID=S3JWP0_TREMD
Uncharacterized protein {ECO:0000313|EMBL:KGE71135.1}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;"
transferase hexapeptide repeat containingprotein
DolJOral78_scaffold_593_5
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4314..5432)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Treponema vincentii F0403 RepID=S3LN85_9SPIO
Pleiotropic regulatory protein {ECO:0000313|EMBL:CEM60424.1}; TaxID=162 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis.;"
Pleiotropic regulatory protein
DolJOral78_scaffold_593_6
Treponema medium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5432..6526)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Treponema medium ATCC 700293 RepID=S3JUG3_TREMD
Uncharacterized protein {ECO:0000313|EMBL:EPF29583.1}; TaxID=1125700 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema medium ATCC 700293.;"
lipopolysaccharide biosynthesis protein
DolJOral78_scaffold_593_7
RLO_Sulfurimonas_36_12, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6542..6847)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI000347EDD6
DNA polymerase beta domain-containing protein Tax=RifCSPlowO2_12_Sulfurimonas_36_12_curated
DNA polymerase beta domain-containing protein region
DolJOral78_scaffold_593_8
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

comp(6848..7273)
DNA (426bp) protein (142aa)
Nucleotidyltransferase substrate binding protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WMY5_9SPIO
nucleotidyltransferase substrate binding protein Tax=GWB2_Planctomycetes_41_19_curated
Nucleotidyltransferase substrate binding protein
DolJOral78_scaffold_593_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7281..8138)
DNA (858bp) protein (286aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20) Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B6Q8_TURPD
DolJOral78_scaffold_593_10
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8213..8719)
DNA (507bp) protein (169aa)
Transcriptional regulator, MarR family n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RA31_SPISS
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADK83350.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (str
DolJOral78_scaffold_593_11
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8748..9149)
DNA (402bp) protein (134aa)
nucleotidyltransferase substrate binding protein id=719142 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
nucleotidyltransferase substrate binding protein
Nucleotidyltransferase substrate binding protein, HI0074 family {ECO:0000313|EMBL:AEJ18263.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Trepo
DolJOral78_scaffold_593_12
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(9134..9454)
DNA (321bp) protein (107aa)
DNA polymerase beta domain protein region id=3551543 bin=GWC1_Spirochaetes_27_15 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
DNA polymerase beta domain-containing protein region Tax=GWD1_Spirochaetes_27_9_curated
DNA polymerase beta domain-containing protein region
DolJOral78_scaffold_593_13
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9770..10750
DNA (981bp) protein (327aa)
PfkB domain protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RA33_SPISS rbh
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ADK83352.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM
DolJOral78_scaffold_593_14
uncultured gamma proteobacterium, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10779..11249)
DNA (471bp) protein (157aa)
Hypothetical conserved protein n=1 Tax=uncultured gamma proteobacterium RepID=H5SBL6_9GAMM
Hypothetical conserved protein {ECO:0000313|EMBL:BAL53552.1}; TaxID=86473 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium.;"
hypothetical protein
DolJOral78_scaffold_593_15
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11385..13160)
DNA (1776bp) protein (592aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=GWC2_Pelobacteraceae_58_13_curated
Aspartate--tRNA ligase id=4829386 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
aspartyl-tRNA synthetase
DolJOral78_scaffold_593_16
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13184..14629)
DNA (1446bp) protein (482aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GG43_SPITZ rbh
aspartyl/glutamyl-tRNA amidotransferase subunit B
DolJOral78_scaffold_593_17
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14629..15972)
DNA (1344bp) protein (448aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=665571
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RRP3_SPITD rbh
DolJOral78_scaffold_593_18
Spirochaeta sp. JC230, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15992..16276)
DNA (285bp) protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RRP4_SPITD
Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:KGE71909.1}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;"
hypothetical protein
DolJOral78_scaffold_593_19
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

16379..17296
DNA (918bp) protein (306aa)
transporter of the bile acid:Na+ symporter family protein n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C2A4 id=98125 bin=ACD65 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=ACD65 organism_group=PER (Peregrinibacteria) organism_desc=PER
putative Na+-dependent transporter Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
putative Na+-dependent transporter
DolJOral78_scaffold_593_20
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17299..17958)
DNA (660bp) protein (220aa)
Recombination protein RecR n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LMT1_TREBD
Recombination protein recR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Trepone
DolJOral78_scaffold_593_21
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17980..18297)
DNA (318bp) protein (106aa)
Nucleoid-associated protein Spiaf_2861 n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UMZ2_SPIAZ
YbaB/EbfC family DNA-binding protein
Nucleoid-associated protein Spiaf_2861 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (st
DolJOral78_scaffold_593_22
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18299..19942)
DNA (1644bp) protein (548aa)
DNA polymerase III, subunits gamma and tau n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8A4_SPISS rbh
DNA polymerase III subunits gamma and tau
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:ADK79248.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae
DolJOral78_scaffold_593_trna_5
unknown

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comp(20109..20193)
DNA (85bp)
transferRNA
DolJOral78_scaffold_593_trna_4
unknown

Not on your lists

comp(20243..20330)
DNA (88bp)
transferRNA
DolJOral78_scaffold_593_trna_3
unknown

Not on your lists

comp(20356..20429)
DNA (74bp)
transferRNA
DolJOral78_scaffold_593_trna_2
unknown

Not on your lists

comp(20623..20709)
DNA (87bp)
transferRNA
DolJOral78_scaffold_593_trna_1
unknown

Not on your lists

comp(20911..20995)
DNA (85bp)
transferRNA
DolJOral78_scaffold_593_23
Enterococcus haemoperoxidus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21194..21520
DNA (327bp) protein (109aa)
PadR family transcriptional regulator n=1 Tax=Enterococcus haemoperoxidus ATCC BAA-382 RepID=R2QWR3_9ENTE
PadR family transcriptional regulator {ECO:0000313|EMBL:EOH99818.1}; TaxID=1158608 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus haemop
padR family transcriptional regulator
DolJOral78_scaffold_593_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21621..22313
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003700A72
Uncharacterized protein {ECO:0000313|EMBL:EJF38574.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
DolJOral78_scaffold_593_25
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22320..23195)
DNA (876bp) protein (292aa)
ParB-like partition protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RA54_SPISS
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:ADK83373.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 112
Displaying items 1-30 of 55 in total

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