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DolJOral78_scaffold_603

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_603_1
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1376..2077)
DNA (702bp) protein (234aa)
UPI0003D1B381 related cluster n=1 Tax=unknown RepID=UPI0003D1B381
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=1169855 species="Bacteria;
hypothetical protein
DolJOral78_scaffold_603_2
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2095..2994)
DNA (900bp) protein (300aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precur
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CRT8_9RHOB rbh
oxidoreductase, molybdopterin-binding protein
DolJOral78_scaffold_603_3
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3132..4619)
DNA (1488bp) protein (496aa)
Glutamate synthase family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FJV9_9RHOB rbh
Glutamate synthase family protein {ECO:0000313|EMBL:EDM72677.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobac
ferredoxin-dependent glutamate synthase
DolJOral78_scaffold_603_4
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4732..5169
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LND8_RUEPO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV96502.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
DolJOral78_scaffold_603_5
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5437..6843
DNA (1407bp) protein (469aa)
Cna protein B-type domain n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WT90_9SYNE
Cna protein B-type domain {ECO:0000313|EMBL:EDX82852.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
putative calcium-binding protein
DolJOral78_scaffold_603_6
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7282..9897)
DNA (2616bp) protein (872aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00035DF396 rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. AN
ATPase AAA
DolJOral78_scaffold_603_7
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10157..10432
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SL28_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP78059.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhi
DolJOral78_scaffold_603_8
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10455..11108)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JMI7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIC49556.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. A
putative lysine exporter protein
DolJOral78_scaffold_603_9
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11112..12179)
DNA (1068bp) protein (356aa)
Putative oxidoreductase n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JMI8_9RHOB rbh
Oxidoreductase {ECO:0000313|EMBL:KIC50152.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
2OG-Fe(II) oxygenase
DolJOral78_scaffold_603_10
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12201..13562)
DNA (1362bp) protein (454aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JMI9_9RHOB rbh
PAS/PAC sensor hybrid histidine kinase
DolJOral78_scaffold_603_11
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13650..14144)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FPJ6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM72199.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. Az
hypothetical protein
DolJOral78_scaffold_603_12
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14226..15896)
DNA (1671bp) protein (557aa)
ctaD; cytochrome c oxidase, aa3-type, subunit I (EC:1.9.3.1)
Cytochrome c oxidase, aa3-type, subunit I n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJT1_9RHOB rbh
Cytochrome c oxidase, aa3-type, subunit I {ECO:0000313|EMBL:EAP77612.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="R
DolJOral78_scaffold_603_13
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16065..17624)
DNA (1560bp) protein (520aa)
OmpA/MotB n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AT61_9RHOB rbh
OmpA/MotB {ECO:0000313|EMBL:EDZ43711.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2083.;"
hypothetical protein
DolJOral78_scaffold_603_14
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17654..18607)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W453_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJS41924.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. B
hypothetical protein
DolJOral78_scaffold_603_15
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18719..21412)
DNA (2694bp) protein (898aa)
Protein translocase subunit SecA n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FL95_9RHOB rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
secA; protein translocase subunit SecA rbh
DolJOral78_scaffold_603_16
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21592..22440
DNA (849bp) protein (283aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FL94_9RHOB rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
DolJOral78_scaffold_603_17
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22445..23668
DNA (1224bp) protein (408aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35) rbh
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQ58_DINSH rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobact
DolJOral78_scaffold_603_18
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23665..24063
DNA (399bp) protein (133aa)
Mutator MutT protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B6Q5_9RHOB
NTP pyrophosphohydrolase {ECO:0000313|EMBL:KIC36337.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. AN
NTP pyrophosphohydrolase
DolJOral78_scaffold_603_19

Not on your lists

24287..24409
DNA (123bp) protein (41aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN64704.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DolJOral78_scaffold_603_20
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24507..27002)
DNA (2496bp) protein (832aa)
Translation initiation factor IF-2 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CR46_9RHOB rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
translation initiation factor IF-2
DolJOral78_scaffold_603_21
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26999..27631)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E0Z2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM31532.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM
hypothetical protein
DolJOral78_scaffold_603_22
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27658..29286)
DNA (1629bp) protein (543aa)
Transcription elongation factor NusA n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKP8_9RHOB rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseova
nusA; transcription termination factor NusA
DolJOral78_scaffold_603_23
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29289..29885)
DNA (597bp) protein (199aa)
Ribosome maturation factor RimP n=1 Tax=Ruegeria sp. R11 RepID=B7QUJ4_9RHOB rbh
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
yhbC; hypothetical protein
DolJOral78_scaffold_603_24
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30095..30790
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI0003777AAD
Wenxma_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ68933.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wen
hypothetical protein
DolJOral78_scaffold_603_25
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30925..31359)
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JU91_9RHOB
MarR family transcriptional regulator {ECO:0000313|EMBL:KAJ02862.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sul
hpaR; homoprotocatechuate degradative operon repressor
DolJOral78_scaffold_603_26
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31573..32544)
DNA (972bp) protein (324aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
pip; proline iminopeptidase Pip (EC:3.4.11.5)
Proline iminopeptidase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FL87_9RHOB rbh
DolJOral78_scaffold_603_27
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32595..33341
DNA (747bp) protein (249aa)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKQ1_9RHOB rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
3-demethylubiquinone-9 3-methyltransferase
DolJOral78_scaffold_603_28
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33360..33662
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FV62_PELBH
Uncharacterized protein {ECO:0000313|EMBL:EAU48264.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermuden
YCII-like protein
DolJOral78_scaffold_603_29
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33665..34108)
DNA (444bp) protein (148aa)
Transcriptional regulator, putative n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FL85_9RHOB
Transcriptional regulator, putative {ECO:0000313|EMBL:EDM73153.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseob
transcriptional regulator, putative
DolJOral78_scaffold_603_30
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34108..34938)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B633_9RHOB rbh
Amidohydrolase {ECO:0000313|EMBL:KIC10290.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
amidohydrolase
Displaying items 1-30 of 49 in total

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