ggKbase home page

DolJOral78_scaffold_644

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_644_1
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..735)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXR8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04521.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
Zinc finger domain-containing protein
DolJOral78_scaffold_644_2
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

865..1434
DNA (570bp) protein (190aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF15396.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
id=4366411 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
DolJOral78_scaffold_644_3
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

1457..2212
DNA (756bp) protein (252aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1RD46_9ACTO rbh
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJA06642.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
DolJOral78_scaffold_644_4
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

2209..3318
DNA (1110bp) protein (370aa)
Putative ABC transporter n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1R9R3_9ACTO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA06938.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
DolJOral78_scaffold_644_5
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

3362..4726
DNA (1365bp) protein (455aa)
Isoform II n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QST0_SPHPG rbh
isoform II
Tax=BJP_IG2102_Acholeplasmatales_34_18
DolJOral78_scaffold_644_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4839..5507)
DNA (669bp) protein (223aa)
DNA alkylation repair enzyme n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0H2_ROSHA
DNA alkylation repair enzyme
DNA alkylation repair enzyme {ECO:0000313|EMBL:AEN95504.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 1
DolJOral78_scaffold_644_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

5657..7141
DNA (1485bp) protein (495aa)
Transporter NhaC family n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EST9_9FIRM rbh
Transporter NhaC family {ECO:0000313|EMBL:CDB03718.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Na+/H+ antiporter NhaC
DolJOral78_scaffold_644_8
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7172..8722)
DNA (1551bp) protein (517aa)
adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase {ECO:0000313|EMBL:AEB10189.1}; EC=4.6.1.1 {ECO:0000313|EMBL:AEB10189.1};; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Des
Adenylate cyclase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFS0_DESAR
DolJOral78_scaffold_644_9
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

comp(8726..10330)
DNA (1605bp) protein (535aa)
Amino acid transporter n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L3Q4_KORCO rbh
amino acid transporter Tax=RBG_16_Chloroflexi_47_49_curated
amino acid transporter
DolJOral78_scaffold_644_10

Not on your lists

comp(10419..11156)
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL26516.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein id=2825581 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
DolJOral78_scaffold_644_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11280..12275
DNA (996bp) protein (332aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WGY3_9SPIO
DolJOral78_scaffold_644_12
bacterium UASB270, Bacteria

Not on your lists

comp(12272..13042)
DNA (771bp) protein (257aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
Selenide, water dikinase n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z9P0_PHOPR
selenophosphate synthase
DolJOral78_scaffold_644_13
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13530..14618
DNA (1089bp) protein (363aa)
Putative ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTR6_SPHPG rbh
basic membrane lipoprotein Tax=RBG_16_Spirochaete_67_19_curated
putative ABC-type transport system, periplasmic component/surface lipoprotein
DolJOral78_scaffold_644_14

Not on your lists

14659..16185
DNA (1527bp) protein (509aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL80847.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATPase component of uncharacterized ABC-type transporter id=4352670 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
ABC transporter ATPase
DolJOral78_scaffold_644_15
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16175..17218
DNA (1044bp) protein (348aa)
ABC transporter permease; K02057 simple sugar transport system permease protein Tax=RBG_16_Spirochaete_67_19_curated
ABC-type uncharacterized transport system, permease component id=4352671 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
ABC transporter permease
DolJOral78_scaffold_644_16
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

17215..18120
DNA (906bp) protein (302aa)
ABC transporter permease; K02057 simple sugar transport system permease protein Tax=RBG_13_Spirochaetes_68_11_curated
Putative ABC-type transport system, permease component id=4352672 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
ABC transporter permease
DolJOral78_scaffold_644_17
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

18117..19562
DNA (1446bp) protein (482aa)
pentulose/hexulose kinase Tax=RBG_13_Spirochaetes_68_11_curated
Pentulose/hexulose kinase id=4352614 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
pentulose/hexulose kinase
DolJOral78_scaffold_644_18
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

19525..20736
DNA (1212bp) protein (404aa)
Fucose permease n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K8A2_HALHC
major facilitator family transporter Tax=RBG_13_Spirochaetes_68_11_curated
fucose permease
DolJOral78_scaffold_644_19
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20729..22468)
DNA (1740bp) protein (580aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Photobacterium sp. AK15 RepID=L8JDM6_9GAMM
putative selenocysteine-specific translation elongation factor
Putative selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:AJR06284.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacte
DolJOral78_scaffold_644_20
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(22469..23818)
DNA (1350bp) protein (450aa)
selenocysteine synthase (EC:2.9.1.1) Tax=RBG_13_Spirochaetes_68_11_curated
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Aeromonas veronii AER39 RepID=K1JEY4_9GAMM rbh
L-seryl-tRNA selenium transferase
DolJOral78_scaffold_644_trna_1
unknown

Not on your lists

comp(23851..23937)
DNA (87bp)
transferRNA
DolJOral78_scaffold_644_21
unknown

Not on your lists

comp(24087..24746)
DNA (660bp) protein (220aa)

This feature has no annotations

DolJOral78_scaffold_644_22
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24818..25750)
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XVB0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ89846.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus yo
thioesterase
DolJOral78_scaffold_644_23
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(25810..27120)
DNA (1311bp) protein (437aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WJK1_9SPIO
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit protein Tax=RBG_16_Caldithrix_48_16_curated
DolJOral78_scaffold_644_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27260..28777
DNA (1518bp) protein (506aa)
putative cysteine synthase (EC:2.5.1.47) Tax=GWF2_Bacteroidetes_41_31_curated
putative cysteine synthase (EC:2.5.1.47)
Putative cysteine synthase id=4064007 bin=GWF2_Bacteroidetes_41_31 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
DolJOral78_scaffold_644_25
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28807..29778)
DNA (972bp) protein (324aa)
Carbamate kinase (EC:2.7.2.2)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00036C6ABC rbh
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispira pacifica.;"
DolJOral78_scaffold_644_26
unknown

Not on your lists

29927..30082
DNA (156bp) protein (52aa)

This feature has no annotations

DolJOral78_scaffold_644_27
unknown

Not on your lists

30157..30672
DNA (516bp) protein (172aa)

This feature has no annotations

DolJOral78_scaffold_644_28
unknown

Not on your lists

30696..30869
DNA (174bp) protein (58aa)

This feature has no annotations

DolJOral78_scaffold_644_29
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

30866..32473
DNA (1608bp) protein (536aa)
Protease IV n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WE16_9SPIO rbh
Protease IV rbh
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC13824.1}; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispi
Displaying items 1-30 of 48 in total

View Taxonomy