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DolJOral78_scaffold_3250

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_3250_1

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227..637
DNA (411bp) protein (137aa)
ISMsm5, transposase n=1 Tax=Actinomyces johnsonii F0542 RepID=U1QB70_9ACTO
Winged helix-turn helix {ECO:0000313|EMBL:AIA11057.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase
DolJOral78_scaffold_3250_2
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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647..973
DNA (327bp) protein (109aa)
Putative transposase (Fragment) n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VK57_9MICO
Putative transposase {ECO:0000313|EMBL:GAB96613.1}; Flags: Fragment;; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC
ISRSO5-transposase protein
DolJOral78_scaffold_3250_3
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1452..1634
DNA (183bp) protein (61aa)
DNA-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5E3DB
excisionase family DNA-binding
Tax=BJP_IG2157_Actinomycetales_63_19
DolJOral78_scaffold_3250_4
Mycobacterium fortuitum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1731..2762
DNA (1032bp) protein (344aa)
DNA modification cytosine-specific methyltransferase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0URQ9_MYCFO rbh
cytosine methyltransferase
DNA modification cytosine-specific methyltransferase {ECO:0000313|EMBL:EJZ09511.1}; TaxID=1214102 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycob
DolJOral78_scaffold_3250_5
Mycobacterium fortuitum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2759..3829
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UWW6_MYCFO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJZ09510.1}; TaxID=1214102 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium fortuitum subsp. for
DolJOral78_scaffold_3250_6
Mycobacterium sp. VKM Ac-1817D, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3826..5340
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VEM6_MYCFO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIY48214.1}; TaxID=1273687 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. VKM Ac-1817D.;"
DolJOral78_scaffold_3250_7
Bradyrhizobium sp. UASWS1016, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5328..7040
DNA (1713bp) protein (571aa)
NERD domain-containing protein n=1 Tax=Arthrobacter sp. SJCon RepID=L8TMV9_9MICC rbh
Contig88, whole genome shotgun sequence {ECO:0000313|EMBL:KIU57534.1}; TaxID=1566379 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
NERD domain-containing protein
DolJOral78_scaffold_3250_8
Mycobacterium fortuitum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7037..10534
DNA (3498bp) protein (1166aa)
Helicase domain-containing protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0V3X8_MYCFO rbh
Helicase domain-containing protein {ECO:0000313|EMBL:EJZ09508.1}; TaxID=1214102 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium fortuitum
helicase
DolJOral78_scaffold_3250_9
Mycobacterium sp. VKM Ac-1817D, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10531..12441
DNA (1911bp) protein (637aa)
Uncharacterized protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UQY4_MYCFO rbh
Uncharacterized protein {ECO:0000313|EMBL:AIY48212.2}; TaxID=1273687 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. VKM Ac-1817D.;"
hypothetical protein rbh
DolJOral78_scaffold_3250_10
Mycobacterium fortuitum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12438..12875)
DNA (438bp) protein (146aa)
DNA mismatch endonuclease Vsr n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0URQ6_MYCFO
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EJZ09506.1}; TaxID=1214102 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium fortuitum subs
DNA mismatch endonuclease Vsr
DolJOral78_scaffold_3250_11
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13198..13338
DNA (141bp) protein (47aa)
Type III restriction-modification system restriction subunit {ECO:0000313|EMBL:CCI53552.1}; EC=3.1.21.5 {ECO:0000313|EMBL:CCI53552.1};; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales;
DolJOral78_scaffold_3250_12
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(13485..13826)
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC00453.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycob
DolJOral78_scaffold_3250_13
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13826..14953)
DNA (1128bp) protein (376aa)
UPI0003D02865 related cluster n=1 Tax=unknown RepID=UPI0003D02865 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC00492.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycob
hypothetical protein
DolJOral78_scaffold_3250_14
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(14950..15624)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Mycobacterium abscessus M93 RepID=I0PKJ0_MYCAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM20174.1}; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB
DolJOral78_scaffold_3250_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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15977..16396
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCR8_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL79603.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 /
DolJOral78_scaffold_3250_16
unknown

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comp(16498..16647)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 16 items

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