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DolJOral78_scaffold_1510

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1510_1
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3..194)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036CF505
Inner-membrane translocator {ECO:0000313|EMBL:EGO65858.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.
inner-membrane translocator
DolJOral78_scaffold_1510_2
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199..1296)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00038146E3
ABC-type uncharacterized transport system, permease component
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:AGF77881.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales;
DolJOral78_scaffold_1510_3
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1319..2845)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000344C69C rbh
ABC transporter {ECO:0000313|EMBL:ENO78249.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
ATPase component of uncharacterized ABC-type transporter
DolJOral78_scaffold_1510_4
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2959..3309)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B4EAC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP64160.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. R
DolJOral78_scaffold_1510_5
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3336..4067)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037F2973
Uncharacterized protein {ECO:0000313|EMBL:EPC01569.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
hypothetical protein
DolJOral78_scaffold_1510_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4123..4956)
DNA (834bp) protein (278aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPU2_9GAMM
Tax=BJP_IG2102_Gammaproteobacteria_62_140
DolJOral78_scaffold_1510_7
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4922..5986)
DNA (1065bp) protein (355aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AKH20681.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AKH20681.1};; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimentico
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036C8F80
DolJOral78_scaffold_1510_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6262..6627
DNA (366bp) protein (122aa)
Response regulator receiver protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXC5_9GAMM
Response regulator receiver protein {ECO:0000313|EMBL:EIJ36018.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
chemotaxis protein CheY
DolJOral78_scaffold_1510_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6664..7104
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000380D545
CheW domain protein {ECO:0000313|EMBL:EIJ36017.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
DolJOral78_scaffold_1510_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7151..9016
DNA (1866bp) protein (622aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXC2_9GAMM
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EIJ36015.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thi
methyl-accepting chemotaxis sensory transducer
DolJOral78_scaffold_1510_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9082..11934
DNA (2853bp) protein (951aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003801752 rbh
CheA signal transduction histidine kinase {ECO:0000313|EMBL:EIJ36014.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thioth
chemotaxis protein histidine kinase-like protein
DolJOral78_scaffold_1510_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11934..12845
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003687DC7
Response regulator receiver protein {ECO:0000313|EMBL:EIJ36013.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
DolJOral78_scaffold_1510_13
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12914..13132)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000365247A
hfq; Protein hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;"
DolJOral78_scaffold_1510_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13301..14629)
DNA (1329bp) protein (443aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
adenylosuccinate synthetase (EC:6.3.4.4)
adenylosuccinate synthetase n=1 Tax=Thiothrix disciformis RepID=UPI000368FF01 rbh
DolJOral78_scaffold_1510_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14608..15792)
DNA (1185bp) protein (395aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPW2_9GAMM
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; T
tRNA synthetase class II (G H P and S)
DolJOral78_scaffold_1510_16
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15996..16964)
DNA (969bp) protein (323aa)
Protein HflC n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPW0_9GAMM rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nive
HflC protein
DolJOral78_scaffold_1510_17
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16964..18166)
DNA (1203bp) protein (401aa)
Protease FtsH subunit HflK n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPV9_9GAMM rbh
Protease FtsH subunit HflK {ECO:0000313|EMBL:EIJ33402.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5
HflK protein
DolJOral78_scaffold_1510_18
unknown

Not on your lists

18506..19927
DNA (1422bp) protein (474aa)

This feature has no annotations

DolJOral78_scaffold_1510_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20164..22479
DNA (2316bp) protein (772aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000379E330
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR00
penicillin-binding protein
DolJOral78_scaffold_1510_20
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22496..23440
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037A77E4
Uncharacterized protein {ECO:0000313|EMBL:CDI01852.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein
DolJOral78_scaffold_1510_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23465..25459
DNA (1995bp) protein (665aa)
Helicase c2 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYZ3_9GAMM rbh
Helicase c2 {ECO:0000313|EMBL:EIJ36586.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
helicase c2
DolJOral78_scaffold_1510_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25459..26160
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000362ECBD
Universal protein YeaZ {ECO:0000313|EMBL:EIJ36587.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.
peptidase M22
DolJOral78_scaffold_1510_23
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26300..27310
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000377860C
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EIJ36184.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sour
transglycosylase
DolJOral78_scaffold_1510_24
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27545..28117
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IU87_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ13837.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
conserved hypothetical protein
DolJOral78_scaffold_1510_25
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28137..28481
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035E1876
hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44969.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
Displaying 25 items

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