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DolJOral78_scaffold_2589

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2589_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65..952
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003703F05
Uncharacterized protein {ECO:0000313|EMBL:EIJ35691.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
DolJOral78_scaffold_2589_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1147..1956
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWF0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ35693.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolJOral78_scaffold_2589_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2016..2393
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWF0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ35693.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
conserved hypothetical protein
DolJOral78_scaffold_2589_4
unknown

Not on your lists

comp(2388..2516)
DNA (129bp) protein (43aa)

This feature has no annotations

DolJOral78_scaffold_2589_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2542..3453
DNA (912bp) protein (304aa)
ApbE family lipoprotein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWF1_9GAMM rbh
ApbE family lipoprotein {ECO:0000313|EMBL:EIJ35694.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
thiamin biosynthesis lipoprotein ApbE
DolJOral78_scaffold_2589_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3682..5571
DNA (1890bp) protein (630aa)
glutathione ABC transporter ATP-binding protein n=1 Tax=Thiothrix disciformis RepID=UPI0003679D0E
ABC transporter related protein {ECO:0000313|EMBL:EIJ35708.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea
ABC transporter ATP-binding protein
DolJOral78_scaffold_2589_7
unknown

Not on your lists

5795..6490
DNA (696bp) protein (232aa)

This feature has no annotations

DolJOral78_scaffold_2589_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6782..9229)
DNA (2448bp) protein (816aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003772914
Uncharacterized protein {ECO:0000313|EMBL:EIJ33494.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
hypothetical protein
DolJOral78_scaffold_2589_9
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9588..10292)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CD75_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ41568.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
DolJOral78_scaffold_2589_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10322..11110)
DNA (789bp) protein (263aa)
Condensin subunit ScpA n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BP78_9GAMM rbh
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothr
hypothetical protein
DolJOral78_scaffold_2589_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11159..12379)
DNA (1221bp) protein (407aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:EIJ33172.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EIJ33172.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichacea
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BP79_9GAMM rbh
DolJOral78_scaffold_2589_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12453..13118)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036A339A
Peptidase M50 {ECO:0000313|EMBL:EIJ33173.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea
peptidase M50
DolJOral78_scaffold_2589_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13119..13745)
DNA (627bp) protein (209aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BP81_9GAMM rbh
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EIJ33174.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix niv
translation factor
DolJOral78_scaffold_2589_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13918..14217
DNA (300bp) protein (100aa)
YCII-related protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XTD1_PSEMY
YciI-like protein
YCII-related protein {ECO:0000313|EMBL:ABP84597.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina
DolJOral78_scaffold_2589_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14230..15108
DNA (879bp) protein (293aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrich
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000366E619
PpiC-type peptidyl-prolyl cis-trans isomerase
DolJOral78_scaffold_2589_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15334..15981)
DNA (648bp) protein (216aa)
Glutathione S-transferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTN5_9BURK
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AFU44007.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS10
DolJOral78_scaffold_2589_17
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16093..16797)
DNA (705bp) protein (235aa)
Probable transcription regulator protein, deoR family n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NVK7_CHRVO
DNA-binding protein {ECO:0000313|EMBL:KIA81452.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium pisc
DeoR family transcriptional regulator
DolJOral78_scaffold_2589_18
unknown

Not on your lists

comp(16800..16901)
DNA (102bp) protein (34aa)

This feature has no annotations

DolJOral78_scaffold_2589_19
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16891..20523)
DNA (3633bp) protein (1211aa)
Cobaltochelatase n=1 Tax=Moritella sp. PE36 RepID=A6FFJ9_9GAMM
Cobaltochelatase {ECO:0000313|EMBL:EDM66058.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella sp. PE36.;"
cobN; cobalamin biosynthetic protein CobN
DolJOral78_scaffold_2589_20
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20838..22322
DNA (1485bp) protein (495aa)
Probable cytosol aminopeptidase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPX8_9GAMM
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Flags: Precursor;;
cytosol aminopeptidase
DolJOral78_scaffold_2589_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22332..22754
DNA (423bp) protein (141aa)
DNA polymerase III, chi subunit {ECO:0000313|EMBL:EIJ33422.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIJ33422.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotricha
DNA polymerase III, chi subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPX9_9GAMM
DNA polymerase III subunit HolC
DolJOral78_scaffold_2589_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22846..23208
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036CE000
Uncharacterized protein {ECO:0000313|EMBL:EIJ33423.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DolJOral78_scaffold_2589_23
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23292..26114
DNA (2823bp) protein (941aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000365D529
valS; valyl-tRNA synthetase
DolJOral78_scaffold_2589_24
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26288..26767
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000361A25F
Uncharacterized protein {ECO:0000313|EMBL:EIJ33149.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
Periplasmic protein TonB, links inner and outer membranes
DolJOral78_scaffold_2589_trna_1
unknown

Not on your lists

26842..26929
DNA (88bp)
transferRNA
Displaying 25 items

View Taxonomy