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DolJOral78_scaffold_2779

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2779_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..372
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CWX0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP16108.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
DolJOral78_scaffold_2779_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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594..2450
DNA (1857bp) protein (619aa)
GTP-binding protein TypA n=1 Tax=Thiothrix flexilis RepID=UPI0003646668 rbh
GTP-binding protein TypA {ECO:0000313|EMBL:EIJ35515.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 520
GTP-binding protein TypA
DolJOral78_scaffold_2779_3
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2542..2709
DNA (168bp) protein (56aa)
IS Sod5 transposase n=1 Tax=gamma proteobacterium D250 RepID=M4HWW9_9GAMM
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:AJY49804.1}; Uncharacterized protein {ECO:0000313|EMBL:AJY52549.1}; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
DolJOral78_scaffold_2779_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2836..3522)
DNA (687bp) protein (229aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Th
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BY77_9GAMM
DolJOral78_scaffold_2779_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3750..4823
DNA (1074bp) protein (358aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQN3_9GAMM rbh
DolJOral78_scaffold_2779_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4816..5574
DNA (759bp) protein (253aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=870187 species="Bacteria
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQN2_9GAMM
hypothetical protein
DolJOral78_scaffold_2779_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5700..6296
DNA (597bp) protein (199aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; G
petA_[H]; Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQN1_9GAMM rbh
DolJOral78_scaffold_2779_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6296..7723
DNA (1428bp) protein (476aa)
Cytochrome b n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQN0_9GAMM rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
cytochrome B
DolJOral78_scaffold_2779_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7735..8487
DNA (753bp) protein (251aa)
Cytochrome c1 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQM9_9GAMM rbh
Cytochrome c1 {ECO:0000313|EMBL:EIJ33672.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea
cytochrome c1
DolJOral78_scaffold_2779_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8551..9207
DNA (657bp) protein (219aa)
stringent starvation protein A n=1 Tax=Thiothrix disciformis RepID=UPI0003723D25
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EIJ33671.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae
glutathione S-transferase domain-containing protein
DolJOral78_scaffold_2779_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9204..9710
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000376D78D
Stringent starvation protein B {ECO:0000313|EMBL:EIJ33670.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea D
sspB; ClpXP protease specificity-enhancing factor
DolJOral78_scaffold_2779_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9723..10211
DNA (489bp) protein (163aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae
folA; dihydrofolate reductase (EC:1.5.1.3)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000370A763
DolJOral78_scaffold_2779_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10234..11595
DNA (1362bp) protein (454aa)
dihydroorotase and related cyclic amidohydrolase (EC:3.5.2.3)
Amidohydrolase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQM5_9GAMM
Amidohydrolase {ECO:0000313|EMBL:EIJ33668.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
DolJOral78_scaffold_2779_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11603..12493)
DNA (891bp) protein (297aa)
Sulphatase-modifying factor protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQT8_9GAMM rbh
Sulphatase-modifying factor protein {ECO:0000313|EMBL:EIJ33731.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
hypothetical protein
DolJOral78_scaffold_2779_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12717..13280
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000376D182
Type IV pilus modification protein PilV {ECO:0000313|EMBL:EIJ33729.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothri
type IV pilus modification protein PilV
DolJOral78_scaffold_2779_16
Shewanella loihica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13351..14241
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000377E1C5
prepilin-type cleavage/methylation-like protein
Prepilin-type cleavage/methylation-like protein {ECO:0000313|EMBL:ABO22975.1}; Flags: Precursor;; TaxID=323850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae;
DolJOral78_scaffold_2779_17
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14256..14771
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003679421
Uncharacterized protein {ECO:0000313|EMBL:EIJ33727.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
DolJOral78_scaffold_2779_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14860..15333
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00037EE047
Pilus assembly protein {ECO:0000313|EMBL:EIJ33726.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.
tfp pilus assembly protein PilE
DolJOral78_scaffold_2779_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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15386..17752
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQT2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ33725.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
type IV pilin biogenesis protein
Displaying 19 items

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