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DolJOral78_scaffold_3284

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_3284_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..172)
DNA (171bp) protein (57aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=743713 species="Bacteria
3-dehydroquinate synthase n=2 Tax=Pseudomonas RepID=J2VUF7_9PSED
DolJOral78_scaffold_3284_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159..695)
DNA (537bp) protein (179aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=870187 species="Bacteria; Proteobacteria; Gammapr
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRI6_9GAMM
DolJOral78_scaffold_3284_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(754..3162)
DNA (2409bp) protein (803aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037C413C
Type IV pilus secretin PilQ {ECO:0000313|EMBL:EIJ33978.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="T
type IV pilus biogenesis protein PilQ
DolJOral78_scaffold_3284_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3190..3753)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000364A8C1
Pilus assembly protein PilP {ECO:0000313|EMBL:EIJ33977.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="T
pilus assembly protein PilP
DolJOral78_scaffold_3284_5
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3771..4421)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000361D137
pilus assembly protein PilO
Pilus assembly protein PilO {ECO:0000313|EMBL:ADC70792.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioal
DolJOral78_scaffold_3284_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4402..4986)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000382F219
Fimbrial assembly family protein {ECO:0000313|EMBL:EIJ33975.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sour
fimbrial assembly family protein
DolJOral78_scaffold_3284_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4986..6038)
DNA (1053bp) protein (351aa)
fimbrial assembly protein n=1 Tax=Thiothrix disciformis RepID=UPI0003690291
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EIJ33974.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
type IV pilus assembly protein PilM
DolJOral78_scaffold_3284_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6275..8932
DNA (2658bp) protein (886aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000378227B
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EIJ33973.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;"
penicillin-binding protein, 1A family
DolJOral78_scaffold_3284_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8932..9564
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRH9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ33972.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolJOral78_scaffold_3284_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9544..10641)
DNA (1098bp) protein (366aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
uroporphyrinogen decarboxylase n=1 Tax=Thiothrix disciformis RepID=UPI000376F23A rbh
uroporphyrinogen decarboxylase
DolJOral78_scaffold_3284_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10657..11103)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000372620D
Uncharacterized protein {ECO:0000313|EMBL:EIJ36575.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
conserved hypothetical protein
DolJOral78_scaffold_3284_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11138..11353)
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=1 Tax=Thiothrix disciformis RepID=UPI0003800E7E
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothri
SSU ribosomal protein S21P
DolJOral78_scaffold_3284_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11489..11893)
DNA (405bp) protein (135aa)
Ferric uptake regulator, Fur family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYY4_9GAMM
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:EIJ36577.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
Fe2+/Zn2+ uptake regulation protein
DolJOral78_scaffold_3284_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11960..12295
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003678621
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Th
membrane protein
DolJOral78_scaffold_3284_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12285..13583)
DNA (1299bp) protein (433aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZP1_9GAMM rbh
DolJOral78_scaffold_3284_16
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13602..14678)
DNA (1077bp) protein (359aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Thiothrix flexilis RepID=UPI00037225BA rbh
DolJOral78_scaffold_3284_17
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14675..15316)
DNA (642bp) protein (214aa)
ATP phosphoribosyltransferase n=1 Tax=Thiothrix flexilis RepID=UPI00037E7C3A rbh
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
ATP phosphoribosyltransferase
DolJOral78_scaffold_3284_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15323..15646)
DNA (324bp) protein (108aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Thiothrix disciformis RepID=UPI00035C9334
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
DolJOral78_scaffold_3284_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15637..16215)
DNA (579bp) protein (193aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Thiothrix disciformis RepID=UPI00035C9334
Displaying 19 items

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