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DolJOral78_scaffold_4025

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_4025_1
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2..229
DNA (228bp) protein (76aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XF52_CELAD
membrane protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga balt
DolJOral78_scaffold_4025_2
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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281..958
DNA (678bp) protein (226aa)
Two component response regulator n=1 Tax=Sagittula stellata E-37 RepID=A3K825_9RHOB
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC39043.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeri
two component response regulator
DolJOral78_scaffold_4025_3
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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945..2309
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Probable two-component sensor histidine kinase protein n=1 Tax=Sagittula stellata E-37 RepID=A3K826_9RHOB
integral membrane sensor signal transduction histidine kinase
DolJOral78_scaffold_4025_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2475..3071
DNA (597bp) protein (199aa)
HupE/UreJ protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPX5_9GAMM
HupE/UreJ protein {ECO:0000313|EMBL:EIJ33418.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix n
HupE/UreJ protein
DolJOral78_scaffold_4025_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3115..3519)
DNA (405bp) protein (135aa)
nickel responsive regulator n=1 Tax=Leucothrix mucor RepID=UPI0003B3747A
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothr
nickel responsive regulator
DolJOral78_scaffold_4025_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3660..4961)
DNA (1302bp) protein (434aa)
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; TaxID=870187 species="Bacte
N-acetylglutamate synthase (EC:2.3.1.1)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037E20A1
DolJOral78_scaffold_4025_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5014..5373)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036B56D7
UPF0102 protein Thini_3136 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea D
hypothetical protein
DolJOral78_scaffold_4025_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5398..7041)
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000367F802
LppC family lipoprotein {ECO:0000313|EMBL:EIJ35660.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
LppC family lipoprotein
DolJOral78_scaffold_4025_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7197..8057
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000377D2FD rbh
16S rRNA methyltransferase
DolJOral78_scaffold_4025_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8026..8730)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000368C8F5
Uncharacterized protein {ECO:0000313|EMBL:EIJ35663.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolJOral78_scaffold_4025_11
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8755..9402)
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037D7A81 rbh
DolJOral78_scaffold_4025_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9524..10054
DNA (531bp) protein (177aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=870187 species="Bac
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003756A77 rbh
inorganic pyrophosphatase
DolJOral78_scaffold_4025_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10170..12134
DNA (1965bp) protein (655aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00035E6081 rbh
Penicillin-binding protein 2 {ECO:0000313|EMBL:EIJ35665.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="
penicillin-binding protein 2
DolJOral78_scaffold_4025_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12131..13243
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037F68DB
Cell elongation-specific peptidoglycan biosynthesis regulator RodA {ECO:0000313|EMBL:EIJ35666.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
rod shape-determining protein RodA
Displaying 14 items

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