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DolJOral78_scaffold_5464

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_5464_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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163..519
DNA (357bp) protein (119aa)
DsrE family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAY8_9PROT
dsrE; DsrE family protein
DsrE family protein {ECO:0000313|EMBL:BAN36375.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrif
DolJOral78_scaffold_5464_2
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(529..1836)
DNA (1308bp) protein (436aa)
Probable DctM (C4-dicarboxylate permease, large subunit) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BM43_NEPCE
Probable DctM (C4-dicarboxylate permease, large subunit) {ECO:0000313|EMBL:EAR61639.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source
putative TRAP-type C4-dicarboxylate transport system, large permease component
DolJOral78_scaffold_5464_3
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1836..2342)
DNA (507bp) protein (169aa)
Putative membrane protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BM44_NEPCE
Putative membrane protein {ECO:0000313|EMBL:EAR61638.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;
tripartite ATP-independent periplasmic transporter DctQ component
DolJOral78_scaffold_5464_4
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2379..3344)
DNA (966bp) protein (322aa)
Probable DctP (Periplasmic C4-dicarboxylate binding protein) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BM45_NEPCE
Probable DctP (Periplasmic C4-dicarboxylate binding protein) {ECO:0000313|EMBL:EAR61637.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" so
TRAP dicarboxylate transporter-DctP subunit
DolJOral78_scaffold_5464_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3641..5338)
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037081F9
Uncharacterized protein {ECO:0000313|EMBL:EIJ33460.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
hypothetical protein
DolJOral78_scaffold_5464_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5585..6013
DNA (429bp) protein (143aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
nucleoside-diphosphate kinase (EC:2.7.4.6)
nucleoside diphosphate kinase n=1 Tax=Thiothrix disciformis RepID=UPI00037AA446
DolJOral78_scaffold_5464_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6026..7138
DNA (1113bp) protein (371aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036D3257 rbh
radical SAM protein
DolJOral78_scaffold_5464_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7135..7884
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000361367D
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:EIJ33463.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Th
type IV pilus biogenesis/stability protein PilW
DolJOral78_scaffold_5464_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7951..9576
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037AAC05
Uncharacterized protein {ECO:0000313|EMBL:EIJ33464.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolJOral78_scaffold_5464_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9582..10421
DNA (840bp) protein (280aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
histidine--tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQ22_9GAMM
Displaying 10 items

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