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DolJOral78_scaffold_4117_5

Organism: DOLJORAL78_Thiothrix_nivea_51_81

near complete RP 48 / 55 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: comp(4421..5545)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037CB4F0 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 385.0
  • Bit_score: 300
  • Evalue 1.70e-78
Type II secretion system protein C (GspC) {ECO:0000313|EMBL:EIJ35200.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thioth similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 378.0
  • Bit_score: 197
  • Evalue 2.80e-47
general secretion pathway protein C similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 126.0
  • Bit_score: 92
  • Evalue 2.00e-16

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGCAAAAACTTAAGCAACAACAATTATTTGATCGTGTTTTCGATCGTCTGCCCGATCACGTAACCTTGCTGCTGATTATTATCAGCGGATTTTTACTGGCCCGGCTGACCTGGATGATGTTTCCATCTGATCCTTCCATCACTGCGCAGGTGGAACGGGAGCAGAACGAGCCCACAGGTGTTGCGGTGATTCCGGCACATGCCACCCCGAAAAATCTGGGTAATGAAATTGCGTCTTACCATTTGTTAGGGGTTTATCAACCACCGAAAGTAGCACCTCCCTCAAAACCGGCCAAGAAAACTGAAGCCCCGAAACCTAAGCCCCGGGAAGCTCTGAGTCTGGTAGGGGTTTATGCCCTGAATGAGAAAGAGGGTGTGGCCGTCATTAATGTTAAGGGTAAGCAGGAAGTTGTCGGGGTTGGAGAGTCGATAGGTGATGCAGCCGCTACGCTGAAAAAAGTCTATGCCAACCGGGTAGATGTGGTCTGGGATGATGGTGAGGTGGCCACGCTGGAAATGCCGAATATTAATCGTTCCGCATTAGGTGCAATACAGATTCCGCCGGAGCAGCAATTGCAGCAACAGCCTGATCCGGTTATACAACCCGCCTCTTTTGAGCAGCCCGATATTCAGAATCAGGGCATTGATCAACCTGTGGCTCCAGATCAGTATAACAACTCGCCCGCATCTGATACAGTTGACCCGCAATTACAGGGTGGCCTGCCTGTTCAGCAACGGCAACCGGTTGCGGTGAATACTGCTGGTCGTGCGCCGACTGCTGCAACTGCCACAAAGCATCAAAAACCAGCCGGAGCTGCTGTTTCATTGAGCGACTTCAAACAGGAAATTATCAATAATAATATTAATCTGCTACAGGTTATCCGTCCCAGCCCACGCAAAAAAAACGGCCAGTTAATCGGTTTTGCGGTGCGTCCCGGTACCAATCGTGCCTTGTTTAATCAGACCGGGCTGCAAGCCGGTGATGTAGTGACCGAGATTAATGGTATGGCATTAACCAATAACCGTGTGAGTCGTCAGGCAATGCAGAGTCTGGCCACCGCATCATCAGCGACACTGACAGTACTGCGCGGTGGTCAGCCAACGACGGTGCAGTTGCGTTTTTAA
PROTEIN sequence
Length: 375
MQKLKQQQLFDRVFDRLPDHVTLLLIIISGFLLARLTWMMFPSDPSITAQVEREQNEPTGVAVIPAHATPKNLGNEIASYHLLGVYQPPKVAPPSKPAKKTEAPKPKPREALSLVGVYALNEKEGVAVINVKGKQEVVGVGESIGDAAATLKKVYANRVDVVWDDGEVATLEMPNINRSALGAIQIPPEQQLQQQPDPVIQPASFEQPDIQNQGIDQPVAPDQYNNSPASDTVDPQLQGGLPVQQRQPVAVNTAGRAPTAATATKHQKPAGAAVSLSDFKQEIINNNINLLQVIRPSPRKKNGQLIGFAVRPGTNRALFNQTGLQAGDVVTEINGMALTNNRVSRQAMQSLATASSATLTVLRGGQPTTVQLRF*