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DolJOral78_scaffold_4117

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_4117_1
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115..420
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GE25_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ44651.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
DolJOral78_scaffold_4117_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(513..1418)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037AE8E0
Uncharacterized protein {ECO:0000313|EMBL:EIJ35152.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
conserved hypothetical protein
DolJOral78_scaffold_4117_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1488..2171
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000362FDAB
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EIJ35151.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sourc
HAD-superfamily hydrolase
DolJOral78_scaffold_4117_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2254..4413
DNA (2160bp) protein (720aa)
relA; (p)ppGpp synthetase (EC:2.7.6.5)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000380744D
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:EIJ35150.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea
DolJOral78_scaffold_4117_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4421..5545)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037CB4F0
Type II secretion system protein C (GspC) {ECO:0000313|EMBL:EIJ35200.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thioth
general secretion pathway protein C
DolJOral78_scaffold_4117_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5562..6584)
DNA (1023bp) protein (341aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV08_9GAMM
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIJ35201.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
NAD-dependent epimerase/dehydratase
DolJOral78_scaffold_4117_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6706..7455)
DNA (750bp) protein (250aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV09_9GAMM
DolJOral78_scaffold_4117_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7527..8021
DNA (495bp) protein (165aa)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thiothrix disciformis RepID=UPI00035ED537
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
DolJOral78_scaffold_4117_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8042..9169
DNA (1128bp) protein (376aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00035F9190 rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
DolJOral78_scaffold_4117_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9173..9766
DNA (594bp) protein (198aa)
methyltransferase n=1 Tax=Thiothrix disciformis RepID=UPI00037E7206
16S rRNA m(2)G 1207 methyltransferase {ECO:0000313|EMBL:EIJ35206.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix
methyltransferase small
DolJOral78_scaffold_4117_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9796..10794)
DNA (999bp) protein (333aa)
PfkB domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUI6_9GAMM rbh
PfkB domain protein {ECO:0000313|EMBL:EIJ35029.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
sugar kinase
DolJOral78_scaffold_4117_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11219..12424)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00035E5028
Uncharacterized protein {ECO:0000313|EMBL:EIJ35025.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
hypothetical protein
DolJOral78_scaffold_4117_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12591..13997)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00037903DA
Uncharacterized protein {ECO:0000313|EMBL:EIJ35024.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DolJOral78_scaffold_4117_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14085..14417)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUI0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ35023.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DolJOral78_scaffold_4117_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14617..15240)
DNA (624bp) protein (208aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=870187 species="Bacteria; Proteob
Repressor lexA (EC:3.4.21.88)
umuDC operon protein-like protein n=1 Tax=Thiothrix disciformis RepID=UPI000365CD6D
DolJOral78_scaffold_4117_16
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15557..16117
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000382439E
NUDIX hydrolase {ECO:0000313|EMBL:EIJ35605.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
ADP-ribose diphosphatase
DolJOral78_scaffold_4117_17
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16180..17280)
DNA (1101bp) protein (367aa)
Polyphosphate kinase {ECO:0000313|EMBL:KHF24341.1}; EC=2.7.4.1 {ECO:0000313|EMBL:KHF24341.1};; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) RepID=A5CVS1_VESOH
DolJOral78_scaffold_4117_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17710..18957)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037315BA
HipA N-terminal domain protein {ECO:0000313|EMBL:EIJ35373.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea D
hypothetical protein rbh
DolJOral78_scaffold_4117_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18957..19226)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003679E61
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EIJ35374.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix
XRE family transcriptional regulator
DolJOral78_scaffold_4117_20
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19307..19750)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNS6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ33019.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolJOral78_scaffold_4117_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20205..21125
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036A6FA1
NAD-dependent DNA ligase
NAD-dependent DNA ligase {ECO:0000313|EMBL:AGA27679.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera ac
Displaying 21 items

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