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DolJOral78_scaffold_4094

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_4094_1
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(172..945)
DNA (774bp) protein (258aa)
ferredoxin--NADP reductase n=1 Tax=Marinobacterium rhizophilum RepID=UPI00036D42DC rbh
oxidoreductase FAD/NAD(P)-binding subunit
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ABM18938.1}; TaxID=351348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;"
DolJOral78_scaffold_4094_2
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1072..1956
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HQ64_9GAMM rbh
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:ERS11385.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="A
DolJOral78_scaffold_4094_3
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2314..3615)
DNA (1302bp) protein (434aa)
magnesium transporter n=1 Tax=Methylomicrobium buryatense RepID=UPI0003476AF9
Magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylo
DolJOral78_scaffold_4094_4
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3612..4376)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. ES-1 RepID=U7FUY1_9ALTE
bax protein
Bax protein {ECO:0000313|EMBL:AJR08715.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbulicola Gung47.
DolJOral78_scaffold_4094_5
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4787..5227)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YHW5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW29570.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
protein of unknown function DUF785
DolJOral78_scaffold_4094_6
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5319..6365)
DNA (1047bp) protein (349aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21J36_SACD2 rbh
Succinylglutamate desuccinylase/aspartoacylase
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ABD81293.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;"
DolJOral78_scaffold_4094_7
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6365..7312)
DNA (948bp) protein (316aa)
Probable alpha-L-glutamate ligase {ECO:0000255|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000255|HAMAP-Rule:MF_01552};; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales
Ribosomal protein S6 modification protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=RIMK_SACD2 rbh
SSU ribosomal protein S6P modification protein rbh
DolJOral78_scaffold_4094_8
Shewanella sp. YQH10, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7486..8361
DNA (876bp) protein (292aa)
Transcriptional regulator, LysR family n=3 Tax=Shewanella baltica RepID=A9KYW7_SHEB9
LysR family transcriptional regulator {ECO:0000313|EMBL:KFZ38681.1}; TaxID=1515746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewan
LysR family transcriptional regulator
DolJOral78_scaffold_4094_9
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8388..9380)
DNA (993bp) protein (331aa)
Transcriptional regulator, AraC family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWX5_9GAMM rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEB79122.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium
AraC family transcriptional regulator
DolJOral78_scaffold_4094_10
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9406..10566)
DNA (1161bp) protein (387aa)
GGDEF domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWX6_9GAMM
GGDEF domain protein {ECO:0000313|EMBL:EEB79094.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
diguanylate cyclase
DolJOral78_scaffold_4094_11
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10693..11466
DNA (774bp) protein (258aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWX7_9GAMM rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KGE04892.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 197
hadH2; 3-hydroxyacyl-CoA dehydrogenase
DolJOral78_scaffold_4094_12
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11477..12610
DNA (1134bp) protein (378aa)
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:KGE04891.1}; EC=5.1.99.4 {ECO:0000313|EMBL:KGE04891.1};; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Ps
CAIB/BAIF family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWX8_9GAMM rbh
L-carnitine dehydratase/bile acid-inducible protein F
DolJOral78_scaffold_4094_13
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12607..13209
DNA (603bp) protein (201aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAC31813.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAC31813.1};; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae;
Enoyl-CoA hydratase n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZSL6_9ALTE
enoyl-CoA hydratase/isomerase
Displaying 13 items

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