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DolJOral78_scaffold_4991

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_4991_1
unknown

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comp(2..85)
DNA (84bp) protein (28aa)

This feature has no annotations

DolJOral78_scaffold_4991_2
unknown

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comp(60..911)
DNA (852bp) protein (284aa)

This feature has no annotations

DolJOral78_scaffold_4991_3
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1250..1690)
DNA (441bp) protein (147aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LJU3_9GAMM
vapC2; nucleic acid-binding protein
DolJOral78_scaffold_4991_4
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1690..1932)
DNA (243bp) protein (81aa)
Putative virulence-associated protein n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LJU4_9GAMM
Putative virulence-associated protein {ECO:0000313|EMBL:EGG92851.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
virulence associated protein VapB
DolJOral78_scaffold_4991_5
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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2559..3506
DNA (948bp) protein (316aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY56_9GAMM rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
DolJOral78_scaffold_4991_6
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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3628..4842
DNA (1215bp) protein (405aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY55_9GAMM rbh
tRNA(Ile)-lysidine synthetase
DolJOral78_scaffold_4991_7
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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5124..6770
DNA (1647bp) protein (549aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY54_9GAMM rbh
DolJOral78_scaffold_4991_8
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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6767..7618
DNA (852bp) protein (284aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY53_9GAMM rbh
DolJOral78_scaffold_4991_9
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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7643..8929
DNA (1287bp) protein (429aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
enolase (EC:4.2.1.11)
Enolase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY52_9GAMM rbh
DolJOral78_scaffold_4991_10
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

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8954..9265
DNA (312bp) protein (104aa)
Cell division protein FtsB n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV91_9GAMM
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC50
septum formation initiator
DolJOral78_scaffold_4991_11
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9252..9971
DNA (720bp) protein (240aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B3495D
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
DolJOral78_scaffold_4991_12
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9976..10470
DNA (495bp) protein (165aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Glaciecola arctica BSs20135 RepID=K6ZBB1_9ALTE
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
DolJOral78_scaffold_4991_13
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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10427..11521
DNA (1095bp) protein (365aa)
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylat
tRNA pseudouridine synthase D n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY48_9GAMM rbh
tRNA pseudouridine synthase D
DolJOral78_scaffold_4991_14
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11502..12176
DNA (675bp) protein (225aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
Protein-L-isoaspartate O-methyltransferase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY47_9GAMM
protein-L-isoaspartate O-methyltransferase
DolJOral78_scaffold_4991_15
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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12176..13111
DNA (936bp) protein (312aa)
Conserved domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY46_9GAMM rbh
Conserved domain protein {ECO:0000313|EMBL:EEB78576.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
hypothetical protein
DolJOral78_scaffold_4991_16
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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13136..13975
DNA (840bp) protein (280aa)
M23 peptidase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY45_9GAMM
Lipoprotein NlpD {ECO:0000313|EMBL:KGE05042.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
peptidase M23B
DolJOral78_scaffold_4991_17
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14169..14492)
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L394_9GAMM
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:KGE05044.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Halie
ferredoxin, 4Fe-4S
DolJOral78_scaffold_4991_18
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14839..16044)
DNA (1206bp) protein (402aa)
DNA mismatch repair protein MutS n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXX7_9GAMM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source=
mutS; DNA mismatch repair protein MutS
Displaying 18 items

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