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DolJOral78_scaffold_1609

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1609_1
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3..125)
DNA (123bp) protein (41aa)
50S ribosomal protein L21 n=1 Tax=Kocuria atrinae RepID=UPI0002DBA80F
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="C
DolJOral78_scaffold_1609_2
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

435..2435
DNA (2001bp) protein (667aa)
Putative PTS system, glucose-specific IIBC component {ECO:0000313|EMBL:EFM39828.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFM39828.1};; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; P
Putative PTS system, glucose-specific IIBC component n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QHF0_9FIRM rbh
hypothetical protein
DolJOral78_scaffold_1609_3
Actinomyces naeslundii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2513..3055)
DNA (543bp) protein (181aa)
hypothetical protein, partial n=1 Tax=Nocardiopsis halotolerans RepID=UPI00037CC26F
putative ribonuclease
Ribonuclease E/G family protein {ECO:0000313|EMBL:EJN83470.1}; TaxID=1115803 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces naeslundii (strain
DolJOral78_scaffold_1609_4
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3000..5339)
DNA (2340bp) protein (780aa)
Putative ribonuclease n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VLF5_9MICO
Putative ribonuclease {ECO:0000313|EMBL:GAB97053.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
ribonuclease, Rne/Rng family
DolJOral78_scaffold_1609_5
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5490..6356)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000370262A
Radical SAM protein {ECO:0000313|EMBL:KFF96646.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
hypothetical protein
DolJOral78_scaffold_1609_6
Streptomyces sp. MBRL 10, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6415..7152)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0Z374_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:KIX72163.1}; TaxID=1592727 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MBRL 10.;"
PspA/IM30 family protein
DolJOral78_scaffold_1609_7
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7224..9113)
DNA (1890bp) protein (630aa)
Putative uncharacterized protein n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GL44_KOCRD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAG29220.1}; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 /
DolJOral78_scaffold_1609_8
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9110..11149)
DNA (2040bp) protein (680aa)
Radical SAM protein n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1E5A2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH80270.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
Fe-S oxidoreductase
DolJOral78_scaffold_1609_9
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11275..11715)
DNA (441bp) protein (147aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0R4_9ACTO
DolJOral78_scaffold_1609_10
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11827..12135)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003651A8D
Uncharacterized protein {ECO:0000313|EMBL:KJC63502.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein
DolJOral78_scaffold_1609_11
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12137..13594)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003802F90
Dihydrofolate synthase {ECO:0000313|EMBL:KGM01601.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
fpgS; folylpolyglutamate synthase
DolJOral78_scaffold_1609_12
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13664..14548
DNA (885bp) protein (295aa)
cof family hydrolase n=1 Tax=Serinicoccus profundi RepID=UPI000255E79B
Cof family hydrolase {ECO:0000313|EMBL:EKA60895.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
cof family hydrolase
DolJOral78_scaffold_1609_13
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14508..16703)
DNA (2196bp) protein (732aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
Catalase-peroxidase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VI78_9MICO rbh
catalase/peroxidase HPI
DolJOral78_scaffold_1609_14
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16940..17701)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKM5_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36945.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
DolJOral78_scaffold_1609_15
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17785..21069)
DNA (3285bp) protein (1095aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5) rbh
Isoleucine--tRNA ligase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TFN2_9MICO rbh
DolJOral78_scaffold_1609_16
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21477..22265
DNA (789bp) protein (263aa)
Alpha/beta hydrolase fold protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYQ3_9ACTO
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EON24418.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
alpha/beta hydrolase fold protein
DolJOral78_scaffold_1609_17
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22316..24205
DNA (1890bp) protein (630aa)
Thimet oligopeptidase (EC:3.4.24.15)
Thimet oligopeptidase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SF28_INTC7 rbh
Peptidase M3 {ECO:0000313|EMBL:EWT00142.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
DolJOral78_scaffold_1609_18
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24316..24717)
DNA (402bp) protein (134aa)
Cytochrome c oxidase polypeptide 4 {ECO:0000256|PIRNR:PIRNR017385}; EC=1.9.3.1 {ECO:0000256|PIRNR:PIRNR017385};; Cytochrome aa3 subunit 4 {ECO:0000256|PIRNR:PIRNR017385}; Cytochrome c oxidase polypept
Cytochrome c oxidase polypeptide 4 n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WD32_KINRD
integral membrane protein
DolJOral78_scaffold_1609_19
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24737..26425)
DNA (1689bp) protein (563aa)
Cytochrome c oxidase, subunit I n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A3N4_CELGA rbh
cytochrome c oxidase, subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:AEI11937.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC
DolJOral78_scaffold_1609_20
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26425..27285)
DNA (861bp) protein (287aa)
Cytochrome c oxidase, subunit II n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FWK2_ISOV2 rbh
cytochrome c oxidase subunit II
Cytochrome c oxidase, subunit II {ECO:0000313|EMBL:AEG44576.1}; Flags: Precursor;; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isopter
DolJOral78_scaffold_1609_21
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27506..28243)
DNA (738bp) protein (246aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
leucyl/phenylalanyl-tRNA/protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E272_9MICO
DolJOral78_scaffold_1609_22
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28277..28651)
DNA (375bp) protein (125aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCD0_INTC7
Uncharacterized protein {ECO:0000313|EMBL:KGN33167.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
iron-sulfur cluster assembly accessory protein
DolJOral78_scaffold_1609_23
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28762..30240)
DNA (1479bp) protein (493aa)
Peptidase M20 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A3M6_CELGA
Uncharacterized protein {ECO:0000313|EMBL:KGM01440.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
peptidase M20
DolJOral78_scaffold_1609_24
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30336..30941
DNA (606bp) protein (202aa)
Integral membrane protein n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1ELY3_9MICO
Integral membrane protein {ECO:0000313|EMBL:EKA60268.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
hypothetical protein
DolJOral78_scaffold_1609_25
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30946..33507)
DNA (2562bp) protein (854aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Ce
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003679D8D
NERD domain-containing protein
DolJOral78_scaffold_1609_26
unknown

Not on your lists

comp(33652..34557)
DNA (906bp) protein (302aa)

This feature has no annotations

DolJOral78_scaffold_1609_27
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34698..36707)
DNA (2010bp) protein (670aa)
exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHJ9_CELFN rbh
DolJOral78_scaffold_1609_28
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36704..38599)
DNA (1896bp) protein (632aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; Exonuclease V subunit RecB {ECO:0000256|HAMA
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002ECF04E
Exodeoxyribonuclease V
DolJOral78_scaffold_1609_29
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38596..40266)
DNA (1671bp) protein (557aa)
exodeoxyribonuclease V beta chain (fragment) (EC:3.1.11.5)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" so
Exodeoxyribonuclease V beta chain n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RVA3_BLASD
DolJOral78_scaffold_1609_30
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40263..43871)
DNA (3609bp) protein (1203aa)
exodeoxyribonuclease V subunit gamma (EC:3.1.11.5)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V, gamma subunit n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FX98_ISOV2
Displaying items 1-30 of 32 in total

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