ggKbase home page

DolJOral78_scaffold_1813

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1813_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1947
DNA (1947bp) protein (649aa)
Cell division FtsK/SpoIIIE n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UD95_CELFN
cell division protein FtsK
Cell division FtsK/SpoIIIE {ECO:0000313|EMBL:ADG74432.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC
DolJOral78_scaffold_1813_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1922..2551
DNA (630bp) protein (210aa)
Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PQU7_MEIRD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EXG81738.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangiu
diguanylate cyclase and serine/threonine protein kinase with TPR repeats
DolJOral78_scaffold_1813_3
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2632..4134
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI000366161C rbh
Diguanylate cyclase {ECO:0000313|EMBL:EWT02379.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
diguanylate cyclase rbh
DolJOral78_scaffold_1813_4
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4268..8161)
DNA (3894bp) protein (1298aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:00
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDA5_INTC7 rbh
DolJOral78_scaffold_1813_5
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8308..10038
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1E4G9_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EKA60242.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
hypothetical protein rbh
DolJOral78_scaffold_1813_6
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10035..11363
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI0003473C9E rbh
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:AAZ56180.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
DolJOral78_scaffold_1813_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11421..12215)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00037E1455
hypothetical protein
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA28202.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
DolJOral78_scaffold_1813_8
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12281..13069)
DNA (789bp) protein (263aa)
Putative AraC family transcriptional regulator n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KKB9_STRAM
AraC family transcriptional regulator {ECO:0000313|EMBL:KGH48428.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp
AraC family transcriptional regulator
DolJOral78_scaffold_1813_9
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13377..13916)
DNA (540bp) protein (180aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:CCH74307.1}; EC=2.1.1.77 {ECO:0000313|EMBL:CCH74307.1};; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae
protein-L-isoaspartate(D-aspartate)O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UQ67_9ACTO
DolJOral78_scaffold_1813_10
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14320..15597
DNA (1278bp) protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00037F1D53
DolJOral78_scaffold_1813_11
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

15594..16268
DNA (675bp) protein (225aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B045_HERA2
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABX03752.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" s
DolJOral78_scaffold_1813_12
unknown

Not on your lists

16386..16745
DNA (360bp) protein (120aa)

This feature has no annotations

DolJOral78_scaffold_1813_13
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16839..17324)
DNA (486bp) protein (162aa)
Osmotically inducible protein n=1 Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DVK2_COREQ
osmotically inducible protein
OsmC-like protein {ECO:0000313|EMBL:EGD22122.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
DolJOral78_scaffold_1813_14
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17592..18017
DNA (426bp) protein (142aa)
Heat shock protein Hsp20 n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EE61_9ACTO
Heat shock protein Hsp20 {ECO:0000313|EMBL:EGQ74861.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F0
hsp20; molecular chaperone Hsp20
DolJOral78_scaffold_1813_15
unknown

Not on your lists

18203..18895
DNA (693bp) protein (231aa)

This feature has no annotations

DolJOral78_scaffold_1813_16
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18948..19787
DNA (840bp) protein (280aa)
ArsR family transcriptional regulator n=1 Tax=Nocardiopsis lucentensis RepID=UPI000362DE58
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGN38752.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 1
transcriptional regulator
DolJOral78_scaffold_1813_17
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19840..21300
DNA (1461bp) protein (487aa)
FeS assembly protein SufB n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9URQ4_9ACTO rbh
FeS assembly protein SufB {ECO:0000313|EMBL:EGD44218.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
FeS assembly protein SufB rbh
DolJOral78_scaffold_1813_18
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21355..22554
DNA (1200bp) protein (400aa)
FeS assembly protein SufD n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X6N8_9MICO rbh
FeS assembly protein SufD {ECO:0000313|EMBL:GAB94479.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
Iron-regulated ABC transporter permease SufD rbh
DolJOral78_scaffold_1813_19
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22602..23366
DNA (765bp) protein (255aa)
FeS assembly ATPase SufC n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVY7_BEUC1 rbh
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGN29287.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
FeS assembly ATPase SufC
DolJOral78_scaffold_1813_20
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23380..24714
DNA (1335bp) protein (445aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" so
Cysteine desulfurase, SufS subfamily n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q4M9_KRIFD rbh
cysteine desulfurase, SufS subfamily
DolJOral78_scaffold_1813_21
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24729..25226
DNA (498bp) protein (166aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B5J9_FRADG
SUF system FeS assembly protein
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:AEH09169.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca
DolJOral78_scaffold_1813_22
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25223..25546
DNA (324bp) protein (108aa)
metal-sulfur cluster biosynthetic enzyme n=1 Tax=Serinicoccus profundi RepID=UPI000255E647
Metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:KGM13661.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogorien
hypothetical protein
DolJOral78_scaffold_1813_23
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(25574..26845)
DNA (1272bp) protein (424aa)
MATE efflux family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CWB4_TRURR rbh
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ADI16064.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera
DolJOral78_scaffold_1813_24
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26970..27266
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UT14_9MICO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB48872.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104
integral membrane protein
DolJOral78_scaffold_1813_25
unknown

Not on your lists

comp(27418..28047)
DNA (630bp) protein (210aa)

This feature has no annotations

DolJOral78_scaffold_1813_26
unknown

Not on your lists

28186..29181
DNA (996bp) protein (332aa)

This feature has no annotations

DolJOral78_scaffold_1813_27
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29237..30403)
DNA (1167bp) protein (389aa)
Aminotransferase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBM0_STRRD rbh
aminotransferase
Aminotransferase {ECO:0000313|EMBL:ACZ86089.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain
DolJOral78_scaffold_1813_28
Arthrobacter aurescens, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30411..31307)
DNA (897bp) protein (299aa)
membrane protein n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI0003786AB4 rbh
zinc metallopeptidase rbh
Putative zinc metallopeptidase {ECO:0000313|EMBL:ABM10284.1}; TaxID=290340 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter aurescens (strain TC1)
DolJOral78_scaffold_1813_29
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31638..33236
DNA (1599bp) protein (533aa)
ABC transporter n=1 Tax=Serinicoccus profundi RepID=UPI000255E643 rbh
ABC transporter {ECO:0000313|EMBL:KGM17106.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = D
ABC transporter ATP-binding protein
DolJOral78_scaffold_1813_30
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33324..35225
DNA (1902bp) protein (634aa)
ABC transporter related protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PKP9_KRIFD rbh
ABC transporter
ABC transporter {ECO:0000313|EMBL:KGN38740.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
Displaying items 1-30 of 31 in total

View Taxonomy