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DolJOral78_scaffold_2967

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2967_1
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(111..1523)
DNA (1413bp) protein (471aa)
1,4-alpha-glucan branching enzyme n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W7J4_KINRD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH78814.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
DolJOral78_scaffold_2967_2
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1614..3398)
DNA (1785bp) protein (595aa)
trehalose synthase n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037E7070 rbh
Trehalose synthase {ECO:0000313|EMBL:EWT02265.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
trehalose synthase
DolJOral78_scaffold_2967_3
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3382..5571)
DNA (2190bp) protein (730aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alph
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Ruania albidiflava RepID=UPI0003B73208
alpha amylase
DolJOral78_scaffold_2967_4
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5653..7908)
DNA (2256bp) protein (752aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Ce
glycogen debranching protein n=1 Tax=Ruania albidiflava RepID=UPI0003B560C9 rbh
glycogen debranching protein GlgX
DolJOral78_scaffold_2967_5
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7938..8420
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TR03_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH78822.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
DolJOral78_scaffold_2967_6
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8502..9698
DNA (1197bp) protein (399aa)
Aminotransferase, class V n=1 Tax=Nocardioides sp. CF8 RepID=R7XZV8_9ACTO
Cysteine desulfurase {ECO:0000313|EMBL:KJY37691.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
class V aminotransferase
DolJOral78_scaffold_2967_7
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9753..10733
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SCK4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:KHL15871.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
DolJOral78_scaffold_2967_8
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10832..12481
DNA (1650bp) protein (550aa)
Transporter n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S5Y5_INTC7 rbh
sodium:neurotransmitter symporter rbh
Transporter {ECO:0000256|RuleBase:RU003732}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (st
DolJOral78_scaffold_2967_9
unknown

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12478..12585
DNA (108bp) protein (36aa)

This feature has no annotations

DolJOral78_scaffold_2967_10
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12706..13161)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8PRH3_STRVR
Uncharacterized protein {ECO:0000313|EMBL:ELS58639.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue5
hypothetical protein
DolJOral78_scaffold_2967_11
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13241..14332
DNA (1092bp) protein (364aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Be
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=MNMA_BEUC1
DolJOral78_scaffold_2967_12
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14393..15196
DNA (804bp) protein (268aa)
Uncharacterized conserved protein n=1 Tax=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) RepID=C5CBH7_MICLC rbh
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ACS31100.1}; TaxID=465515 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (strain ATCC 4
DolJOral78_scaffold_2967_13
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15283..16341
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UQP9_9MICO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB48057.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104
hypothetical protein rbh
DolJOral78_scaffold_2967_14
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16384..17145)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJU2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAP98647.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
DolJOral78_scaffold_2967_15
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17142..17813)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJU1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGN40245.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
sigma-70 region 4 type 2
DolJOral78_scaffold_2967_16
unknown

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comp(17878..18168)
DNA (291bp) protein (97aa)

This feature has no annotations

DolJOral78_scaffold_2967_17
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18396..20390
DNA (1995bp) protein (665aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
NAD-dependent DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Serinicoccus profundi RepID=UPI000255EB6E rbh
DolJOral78_scaffold_2967_18
Dermabacter hominis, Dermabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20668..20961
DNA (294bp) protein (98aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
aspartyl/glutamyl-tRNA amidotransferase subunit C n=1 Tax=Brachybacterium muris RepID=UPI00034D7471
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C
DolJOral78_scaffold_2967_19
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20967..22538
DNA (1572bp) protein (524aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=590998
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7A1_CELFA rbh
DolJOral78_scaffold_2967_20
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22535..24088
DNA (1554bp) protein (518aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DVB4_9MICO rbh
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
DolJOral78_scaffold_2967_21
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24151..26517
DNA (2367bp) protein (789aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W4V7_KINRD
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABS01846.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (
DolJOral78_scaffold_2967_22
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26617..28320
DNA (1704bp) protein (568aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
ilvD1; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WUF1_9MICO rbh
DolJOral78_scaffold_2967_23
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28587..30416
DNA (1830bp) protein (610aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" so
Acetolactate synthase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6R5_CELFA rbh
acetolactate synthase, large subunit, biosynthetic type
DolJOral78_scaffold_2967_24
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30409..30921
DNA (513bp) protein (171aa)
acetolactate synthase n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003809C72
ilvH; acetolactate synthase 3 regulatory subunit
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ABW10547.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
DolJOral78_scaffold_2967_25
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30955..31980
DNA (1026bp) protein (342aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase (EC:1.1.1.86)
ketol-acid reductoisomerase n=1 Tax=Actinopolymorpha alba RepID=UPI00036FB6CB
DolJOral78_scaffold_2967_26
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31977..32999
DNA (1023bp) protein (341aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:EWT06115.1}; EC=1.1.1.85 {ECO:0000313|EMBL:EWT06115.1};; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intraspora
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6R1_CELFA rbh
DolJOral78_scaffold_2967_27
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33107..34189
DNA (1083bp) protein (361aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiacea
Branched-chain-amino-acid aminotransferase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W7Q2_KINRD rbh
DolJOral78_scaffold_2967_28
unknown

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35743..36048
DNA (306bp) protein (102aa)

This feature has no annotations

DolJOral78_scaffold_2967_29
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38489..38707)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI000373DE53
Hydrolase {ECO:0000313|EMBL:KJK13341.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
putative hydrolase
Displaying 29 items

View Taxonomy