ggKbase home page

DolJOral78_scaffold_8797

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_8797_1
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..557
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TGI5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGN34932.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
DolJOral78_scaffold_8797_2
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

699..1496
DNA (798bp) protein (266aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JYB0_ARTS2 rbh
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EWT00491.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NR
ECF subfamily RNA polymerase sigma-24 factor rbh
DolJOral78_scaffold_8797_3
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1493..1759
DNA (267bp) protein (89aa)
Anti-sigma factor n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSA2_ACIC1
anti-sigma factor
Anti-sigma factor {ECO:0000313|EMBL:ABK52312.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068
DolJOral78_scaffold_8797_4
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1894..2109
DNA (216bp) protein (72aa)
acetyl-CoA carboxylase n=1 Tax=Mycobacterium avium RepID=UPI00037F91B9
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
Putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit {ECO:0000313|EMBL:AEF36934.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacteriu
DolJOral78_scaffold_8797_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2186..3334
DNA (1149bp) protein (383aa)
Twitching motility protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSB3_ACIC1 rbh
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ABK52323.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain A
DolJOral78_scaffold_8797_6
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3390..4610)
DNA (1221bp) protein (407aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5ULS1_CELFN rbh
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ADG76027.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (s
DolJOral78_scaffold_8797_7
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4837..5640
DNA (804bp) protein (268aa)
Endonuclease IV {ECO:0000313|EMBL:EAP97041.1}; EC=3.1.21.2 {ECO:0000313|EMBL:EAP97041.1};; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Jani
Endonuclease IV n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TS26_9MICO rbh
endonuclease IV
DolJOral78_scaffold_8797_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5760..6155)
DNA (396bp) protein (132aa)
Superoxide dismutase (Ni) {ECO:0000313|EMBL:CCH21118.1}; EC=1.15.1.1 {ECO:0000313|EMBL:CCH21118.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonosp
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase (Ni) n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LBC1_9ACTO
DolJOral78_scaffold_8797_9
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6264..6575
DNA (312bp) protein (104aa)
peptidase S24 n=1 Tax=Frankia sp. BCU110501 RepID=UPI00035C78E8
peptidase S24/S26A/S26B, conserved region
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:AEH08488.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glo
DolJOral78_scaffold_8797_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7001..7237)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HIQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29443.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia in
DolJOral78_scaffold_8797_11
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7381..7935
DNA (555bp) protein (185aa)
Malic protein NAD-binding protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S795_INTC7
malic protein NAD-binding protein
Malic protein NAD-binding protein {ECO:0000313|EMBL:ADU49029.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (s
DolJOral78_scaffold_8797_12
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8052..9020
DNA (969bp) protein (323aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EUX2_MODMB rbh
Molecular chaperone GroES {ECO:0000313|EMBL:KGH45891.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;
Zn-dependent oxidoreductase
DolJOral78_scaffold_8797_13
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9047..9658)
DNA (612bp) protein (204aa)
lysophospholipase n=1 Tax=Ruania albidiflava RepID=UPI0003B68CEF
Lysophospholipase {ECO:0000313|EMBL:KEP23483.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
G-D-S-L family lipolytic protein
DolJOral78_scaffold_8797_14
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9712..9906)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2G520_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE82385.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
DolJOral78_scaffold_8797_15
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9979..13521)
DNA (3543bp) protein (1181aa)
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W7C7_KINRD rbh
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:ABS02716.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotoleran
kgd; alpha-ketoglutarate decarboxylase
DolJOral78_scaffold_8797_16
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13927..15339
DNA (1413bp) protein (471aa)
Inosine-5-monophosphate dehydrogenase {ECO:0000313|EMBL:KGM12565.1}; EC=1.1.1.205 {ECO:0000313|EMBL:KGM12565.1};; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cell
inosine 5-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine 5-monophosphate dehydrogenase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F3F9_VERMA
DolJOral78_scaffold_8797_17
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15374..16726
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W7D3_KINRD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABS02722.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BA
DolJOral78_scaffold_8797_18
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16723..17760
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H643_CELFA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFD43034.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
hypothetical protein
DolJOral78_scaffold_8797_trna_1
unknown

Not on your lists

17866..17937
DNA (72bp)
transferRNA
DolJOral78_scaffold_8797_19
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17877..18674)
DNA (798bp) protein (266aa)
Integral membrane protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C4Y5_BEUC1
Membrane protein {ECO:0000313|EMBL:KGM01795.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
integral membrane protein
DolJOral78_scaffold_8797_20
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18774..19781)
DNA (1008bp) protein (336aa)
Lipoyl synthase {ECO:0000255|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000255|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000255|HAMAP-Rule:MF_00206}; Short=LS {ECO:0000255|HAMAP-Rule:MF_00206};; Lipoate syntha
Lipoyl synthase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=LIPA_KINRD rbh
lipoyl synthase rbh
DolJOral78_scaffold_8797_21
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20140..20682
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0H9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON25122.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
DolJOral78_scaffold_8797_22
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21476..22528
DNA (1053bp) protein (351aa)
Geranylgeranyl reductase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEK4_NOCSJ rbh
geranylgeranyl reductase
Geranylgeranyl reductase {ECO:0000313|EMBL:ABL80239.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp
Displaying 23 items

View Taxonomy