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DolJOral78_scaffold_3580

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_3580_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..264)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI0003613391
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACV80599.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurell
DolJOral78_scaffold_3580_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(261..1274)
DNA (1014bp) protein (338aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAR5_STRRD rbh
binding-protein-dependent transporter inner membrane component rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ89895.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosp
DolJOral78_scaffold_3580_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1285..2814)
DNA (1530bp) protein (510aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAR4_STRRD rbh
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like protein {ECO:0000313|EMBL:ACZ89894.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptospo
DolJOral78_scaffold_3580_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2978..4693)
DNA (1716bp) protein (572aa)
ABC-type dipeptide transport system periplasmic component-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAR3_STRRD rbh
dipeptide ABC transporter periplasmic component-like protein rbh
ABC-type dipeptide transport system periplasmic component-like protein {ECO:0000313|EMBL:ACZ89893.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Strepto
DolJOral78_scaffold_3580_5
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4980..5306
DNA (327bp) protein (109aa)
Putative 7Fe ferredoxin n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WV85_9MICO
Putative 7Fe ferredoxin {ECO:0000313|EMBL:GAB96022.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
ferredoxin
DolJOral78_scaffold_3580_6
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5303..6418
DNA (1116bp) protein (372aa)
succinyldiaminopimelate aminotransferase apoenzyme (EC:2.6.1.17)
Succinyldiaminopimelate aminotransferase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WQB7_9MICO rbh
Succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:GAB96021.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NB
DolJOral78_scaffold_3580_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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6519..7817
DNA (1299bp) protein (433aa)
citrate synthase I (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geode
Citrate synthase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9P7_GEOOG rbh
DolJOral78_scaffold_3580_8
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7850..8734)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPT8_ISOV2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEG43727.1}; Flags: Precursor;; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isopter
DolJOral78_scaffold_3580_9
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8741..9679)
DNA (939bp) protein (313aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPT9_ISOV2 rbh
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
DolJOral78_scaffold_3580_10
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9848..11086)
DNA (1239bp) protein (413aa)
hypothetical protein, partial n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003767552
Integral membrane protein {ECO:0000313|EMBL:KGM12423.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
putative integral membrane protein
DolJOral78_scaffold_3580_11
Streptomyces fulvissimus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11083..11592)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Streptomyces sp. CcalMP-8W RepID=UPI00037CC923
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK75569.1}; TaxID=1303692 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fulvissimus DSM 40593.
DolJOral78_scaffold_3580_12
Streptomyces cyaneogriseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11582..11977)
DNA (396bp) protein (132aa)
Secreted protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V172_9ACTO
DivIVA domain protein
Streptomyces cyaneogriseus subsp. noncyanogenus strain NMWT 1, complete genome {ECO:0000313|EMBL:AJP03650.1}; TaxID=477245 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Strep
DolJOral78_scaffold_3580_13
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12051..12818)
DNA (768bp) protein (256aa)
UPI0003D662B4 related cluster n=1 Tax=unknown RepID=UPI0003D662B4 rbh
DNA-binding protein {ECO:0000313|EMBL:KGE99726.1}; TaxID=1284679 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis S6-C4.;"
hypothetical protein
DolJOral78_scaffold_3580_14
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12881..14008)
DNA (1128bp) protein (376aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:KGM12426.1}; EC=3.5.1.18 {ECO:0000313|EMBL:KGM12426.1};; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cell
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
succinyl-diaminopimelate desuccinylase n=1 Tax=Promicromonospora sukumoe RepID=UPI00037EDABA rbh
DolJOral78_scaffold_3580_15
Propionibacterium acidifaciens, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14180..14668
DNA (489bp) protein (163aa)
TENA/THI-4 family protein n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2RI58_9ACTO
TENA/THI-4 family protein {ECO:0000313|EMBL:ERK50412.1}; TaxID=553198 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidi
TenA family transcriptional activator
Displaying 15 items

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