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DolJOral78_scaffold_25

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Displaying items 1-30 of 321 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_25_1
unknown

Not on your lists

3..104
DNA (102bp) protein (34aa)

This feature has no annotations

DolJOral78_scaffold_25_2
unknown

Not on your lists

comp(166..1023)
DNA (858bp) protein (286aa)

This feature has no annotations

DolJOral78_scaffold_25_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1166..1489)
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:ADZ70120.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 /
DolJOral78_scaffold_25_4
unknown

Not on your lists

comp(1495..1734)
DNA (240bp) protein (80aa)

This feature has no annotations

DolJOral78_scaffold_25_5
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1828..2436)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037DFDD7
Uncharacterized protein {ECO:0000313|EMBL:KFI25684.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
hypothetical protein
DolJOral78_scaffold_25_6
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3531..4268
DNA (738bp) protein (246aa)
Type I secretion target repeat protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CD04_9RHOB
Type I secretion target repeat protein {ECO:0000313|EMBL:EAR50572.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Ocea
type I secretion target repeat protein
DolJOral78_scaffold_25_7
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4302..4955)
DNA (654bp) protein (218aa)
Putative MobA-like protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3J295_RHOS4
putative MobA-like protein
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA79089.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
DolJOral78_scaffold_25_8
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5226..5780)
DNA (555bp) protein (185aa)
Twin-arginine translocation pathway signal sequence domain protein, putative n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SPK5_9RHOB
Twin-arginine translocation pathway signal sequence domain protein, putative {ECO:0000313|EMBL:EAP76395.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodoba
hypothetical protein
DolJOral78_scaffold_25_9
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5937..6977)
DNA (1041bp) protein (347aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacteral
hemB; delta-aminolevulinic acid dehydratase HemB (EC:4.2.1.24) rbh
delta-aminolevulinic acid dehydratase n=1 Tax=Wenxinia marina RepID=UPI00037FE039 rbh
DolJOral78_scaffold_25_10
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7016..7600
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E453_9RHOB
Component of SufBCD complex {ECO:0000313|EMBL:KAJ56801.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacteri
hypothetical protein
DolJOral78_scaffold_25_11
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7641..11072
DNA (3432bp) protein (1144aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=246200 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LRQ1_RUEPO
mfd; transcription-repair coupling factor
DolJOral78_scaffold_25_12
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11076..11609)
DNA (534bp) protein (178aa)
Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FR27_PELBH
Transcriptional regulator, Crp/Fnr family protein {ECO:0000313|EMBL:EAU46760.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" s
Crp/Fnr family transcriptional regulator
DolJOral78_scaffold_25_13
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11950..12516)
DNA (567bp) protein (189aa)
UPI0003D1C775 related cluster n=1 Tax=unknown RepID=UPI0003D1C775
Uncharacterized protein {ECO:0000313|EMBL:ETW14154.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanti
hypothetical protein
DolJOral78_scaffold_25_14
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12822..14417
DNA (1596bp) protein (532aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DFC7_9RHOB rbh
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:EET48294.1}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" source="Th
hypothetical protein rbh
DolJOral78_scaffold_25_15
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14428..15501
DNA (1074bp) protein (358aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodob
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037FC635 rbh
DolJOral78_scaffold_25_16
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15531..15791
DNA (261bp) protein (87aa)
phosphopantetheine-binding protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557DE2
Acyl carrier protein {ECO:0000313|EMBL:EPX78415.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM
phosphopantetheine-binding protein
DolJOral78_scaffold_25_17
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15793..17001
DNA (1209bp) protein (403aa)
fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase FabF (EC:2.3.1.179) rbh
3-oxoacyl-(Acyl-carrier-protein) synthase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V5N3_9RHOB rbh
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:EAQ06207.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="L
DolJOral78_scaffold_25_18
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17156..17803)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CG89_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAR51640.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulos
invasion protein B-like protein
DolJOral78_scaffold_25_19
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18296..19855
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RKF4_9RHOB
Putative ATPase {ECO:0000313|EMBL:KHQ54183.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;
hypothetical protein DUF853
DolJOral78_scaffold_25_20
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19971..21257)
DNA (1287bp) protein (429aa)
CBS domain protein n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DFD3_9RHOB rbh
CBS domain protein {ECO:0000313|EMBL:EET49860.1}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" source="Thalassobium sp. R2A62
inner membrane protein
DolJOral78_scaffold_25_21
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21312..22262)
DNA (951bp) protein (317aa)
Tyrosine recombinase XerD n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V5N6_9RHOB rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sul
tyrosine recombinase XerD
DolJOral78_scaffold_25_22
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22259..23812)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3AJM3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD54988.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnaba
hypothetical protein
DolJOral78_scaffold_25_23
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23809..23967)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9Y3R5_KETVW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO42227.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonic
DolJOral78_scaffold_25_24
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24095..24682
DNA (588bp) protein (196aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=252305 species="Bacteria; Proteobacteria; Alphapr
Shikimate kinase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U2L1_9RHOB
putative shikimate kinase
DolJOral78_scaffold_25_25
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24675..25787
DNA (1113bp) protein (371aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1423144 species="Bacteri
UPI0003D69D67 related cluster n=1 Tax=unknown RepID=UPI0003D69D67
DolJOral78_scaffold_25_26
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25863..27029)
DNA (1167bp) protein (389aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
metK; methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CE45_9RHOB rbh
DolJOral78_scaffold_25_27
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27123..28598)
DNA (1476bp) protein (492aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF
cutE; apolipoprotein N-acyltransferase (EC:2.3.1.-)
apolipoprotein N-acyltransferase n=1 Tax=Loktanella vestfoldensis RepID=UPI000360370D rbh
DolJOral78_scaffold_25_28
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28605..29483)
DNA (879bp) protein (293aa)
Putative magnesium and cobalt efflux protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RLK4_9RHOB
putative magnesium and cobalt efflux protein
Putative magnesium and cobalt efflux protein {ECO:0000313|EMBL:AGI73052.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" so
DolJOral78_scaffold_25_29
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29564..30064)
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=252305 species="Bacteria; Pr
Endoribonuclease YbeY n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U2B9_9RHOB
Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly
DolJOral78_scaffold_25_30
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30068..31063)
DNA (996bp) protein (332aa)
PhoH family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CE41_9RHOB
PhoH family protein {ECO:0000313|EMBL:EAR50897.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (
PhoH-like protein
Displaying items 1-30 of 321 in total

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