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DolJOral78_scaffold_998

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_998_1
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21..419
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037C8CE5
Membrane protein {ECO:0000313|EMBL:KGN97258.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
hypothetical protein
DolJOral78_scaffold_998_2
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(474..1601)
DNA (1128bp) protein (376aa)
response regulator receiver sensor signal transduction histidine kinase Tax=GWA2_Bacteroidetes_31_9b_curated
PAS/PAC sensor signal transduction histidine kinase id=4524499 bin=GWF2_Bacteroidetes_38_335 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
histidine kinase
DolJOral78_scaffold_998_3
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1912..3015)
DNA (1104bp) protein (368aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
hypothetical protein MsalJ2_01007 id=3532842 bin=GWF2_Bacteroidetes_38_335 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
penicillin-binding protein
DolJOral78_scaffold_998_4
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3065..4054)
DNA (990bp) protein (330aa)
GTPase obg; K03979 GTP-binding protein Tax=RBG_13_Bacteroidetes_43_22_curated
GTPase CgtA id=3543868 bin=GWC2_Bacteroidetes_40_13 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
GTPase CgtA
DolJOral78_scaffold_998_5
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4097..5926)
DNA (1830bp) protein (610aa)
DNA topoisomerase type IIA subunit B region 2 domain-containing protein; K02622 topoisomerase IV subunit B [EC:5.99.1.-] Tax=GWA2_Bacteroidetes_31_9_curated
DNA topoisomerase type IIA subunit B region 2 domain protein id=2924019 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
DNA topoisomerase type IIA subunit B region 2 domain-containing protein
DolJOral78_scaffold_998_6
unknown

Not on your lists

comp(5910..6071)
DNA (162bp) protein (54aa)

This feature has no annotations

DolJOral78_scaffold_998_7
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6075..6908)
DNA (834bp) protein (278aa)
Uncharacterized protein id=3990917 bin=GWF2_Bacteroidetes_38_335 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
DolJOral78_scaffold_998_8
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7270..7791)
DNA (522bp) protein (174aa)
Flavodoxin id=2145259 bin=GWD2_Bacteroidetes_33_33 species=unknown genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
flavodoxin FldA; K03839 flavodoxin I Tax=GWD2_Bacteroidetes_33_33_curated
flavodoxin FldA
DolJOral78_scaffold_998_9
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7889..8605)
DNA (717bp) protein (239aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
Putative uncharacterized protein id=3747251 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
DolJOral78_scaffold_998_10
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9348..11171
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AIG4_FLELS
Uncharacterized protein {ECO:0000313|EMBL:EZH75701.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;
hypothetical protein
DolJOral78_scaffold_998_11
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

11172..11849
DNA (678bp) protein (226aa)
Leucyl/phenylalanyl-tRNA--protein transferase id=4626841 bin=GWC2_Bacteroidetes_40_13 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
leucyl/phenylalanyl-tRNA--protein transferase
Tax=BJP_IG2102_Bacteroidetes_40_9
DolJOral78_scaffold_998_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11846..12247)
DNA (402bp) protein (134aa)
hypothetical protein AnHS1_01678 id=2007722 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
DolJOral78_scaffold_998_13
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12497..12976)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000371CA42
response regulator containing a CheY-like receiver domain and an HD-GYP domain
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:AJQ92391.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; u
DolJOral78_scaffold_998_14
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12989..14326)
DNA (1338bp) protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oc
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000367B487
signal transduction histidine kinase regulating C4-dicarboxylate transport system
DolJOral78_scaffold_998_15
Photobacterium phosphoreum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14329..15759)
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000375DFC2
Transporter, divalent anion:Na+ symporter family protein {ECO:0000313|EMBL:CEO38726.1}; TaxID=1454202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.
transporter
DolJOral78_scaffold_998_16
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16050..19379)
DNA (3330bp) protein (1110aa)
Two component regulator three Y motif family id=3881930 bin=GWF2_Bacteroidetes_33_16 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
protein serine/threonine phosphatase Tax=GWE2_Bacteroidetes_32_14_curated
Ser/Thr phosphatase
DolJOral78_scaffold_998_17
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19932..20390
DNA (459bp) protein (153aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Bacteroidetes_42_15_curated
RNA polymerase, sigma-24 subunit, ECF subfamily id=2059024 bin=GWD2_Bacteroidetes_33_33 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
ECF subfamily RNA polymerase sigma-24 subunit
DolJOral78_scaffold_998_18
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20393..20929
DNA (537bp) protein (179aa)
Putative uncharacterized protein id=2170330 bin=GWB2_Bacteroidetes_32_14 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
DolJOral78_scaffold_998_19
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21046..22101
DNA (1056bp) protein (352aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9b_curated
Putative uncharacterized protein id=2059029 bin=GWD2_Bacteroidetes_33_33 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
DolJOral78_scaffold_998_20
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22114..22956)
DNA (843bp) protein (281aa)
Prolipoprotein diacylglyceryl transferase id=3978867 bin=GWF2_Bacteroidetes_33_16 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
prolipoprotein diacylglyceryl transferase Tax=GWE2_Bacteroidetes_32_14_curated
prolipoprotein diacylglyceryl transferase
DolJOral78_scaffold_998_21
unknown

Not on your lists

23208..23396
DNA (189bp) protein (63aa)

This feature has no annotations

DolJOral78_scaffold_998_22
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23651..24196)
DNA (546bp) protein (182aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BE96_CLOBO
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:GAO31163.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum J
cobinamide adenolsyltransferase
DolJOral78_scaffold_998_23
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24416..24844
DNA (429bp) protein (143aa)
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO42339.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;"
RNA polymerase ECF-type sigma factor
RNA polymerase, sigma-24 subunit, ECF subfamily id=4001139 bin=GWF2_Bacteroidetes_38_335 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
DolJOral78_scaffold_998_24
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

25057..25224
DNA (168bp) protein (56aa)
4Fe-4S binding domain. Tax=CG_Bacteroid_01
ferredoxin id=1856122 bin=GWD2_Bacteroidetes_33_33 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
ferredoxin
DolJOral78_scaffold_998_25
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

25572..26447
DNA (876bp) protein (292aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylob
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BKG0_9HELI rbh
DolJOral78_scaffold_998_26
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

26463..27014
DNA (552bp) protein (184aa)
dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_CP01_01
rfbC_1; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248EC16
DolJOral78_scaffold_998_27
Francisella philomiragia, Francisella, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27023..27895
DNA (873bp) protein (291aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KFJ42682.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KFJ42682.1};; TaxID=28110 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francise
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WZL7_NITSE rbh
DolJOral78_scaffold_998_28
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

27934..28959
DNA (1026bp) protein (342aa)
dtdp-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Ni
dTDP-glucose 4,6-dehydratase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A6483
DolJOral78_scaffold_998_29
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

29134..30186
DNA (1053bp) protein (351aa)
NAD-dependent epimerase/dehydratase (EC:5.1.3.12)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADV47241.1}; EC=5.1.3.12 {ECO:0000313|EMBL:ADV47241.1};; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
NAD-dependent epimerase/dehydratase n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X2V8_NITSE
DolJOral78_scaffold_998_30
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30235..31368
DNA (1134bp) protein (378aa)
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis id=3847276 bin=GWF2_Bacteroidetes_33_38 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Pleiotropic regulatory protein
Displaying items 1-30 of 36 in total

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