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DolJOral78_scaffold_676

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Displaying items 31-56 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_676_31
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(35899..36285)
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK18_SORCE
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Ch
30S ribosomal protein S11
DolJOral78_scaffold_676_32
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(36414..36788)
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCF8_9DELT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="
30S ribosomal protein S13
DolJOral78_scaffold_676_33
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(36803..36916)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E5B5_9FIRM
50S ribosomal protein L36
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Nitrospirae_64_22_curated
DolJOral78_scaffold_676_34
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(36966..37793)
DNA (828bp) protein (276aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Methionine aminopeptidase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBP0_ANADF
methionine aminopeptidase
DolJOral78_scaffold_676_35
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(37838..39160)
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIA5_HALO1 rbh
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Ko
DolJOral78_scaffold_676_36
RBG_19FT_COMBO_Deltaproteobacteria_56_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(39297..39809)
DNA (513bp) protein (171aa)
50S ribosomal protein L15 n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI0003606A0A
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_19FT_COMBO_Deltaproteobacteria_56_10_curated
50S ribosomal protein L15
DolJOral78_scaffold_676_37
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(39865..40056)
DNA (192bp) protein (64aa)
50S ribosomal protein L30 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCG2_9DELT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocyst
50S ribosomal protein L30
DolJOral78_scaffold_676_38
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(40060..40566)
DNA (507bp) protein (169aa)
30S ribosomal protein S5 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIA8_HALO1
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriace
DolJOral78_scaffold_676_39
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(40595..40957)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 id=4460801 bin=GWF2_Bacteroidetes_41_9 species=unknown genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=GWA2_Bacteroidetes_40_15_curated
rplR; 50S ribosomal protein L18
DolJOral78_scaffold_676_40
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(41059..41595)
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Butyrivibrio RepID=UPI0003B5736C
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" sourc
DolJOral78_scaffold_676_41
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists


comp(41650..42048)
DNA (399bp) protein (133aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=24537580 bin=RBG_19FT_COMBO_GAL15_69_19 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
30S ribosomal protein S8
DolJOral78_scaffold_676_42
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(42059..42238)
DNA (180bp) protein (60aa)
Ribosomal protein S14 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIB2_HALO1
30S ribosomal protein S14
Ribosomal protein S14 {ECO:0000313|EMBL:ACY16491.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium o
DolJOral78_scaffold_676_43
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(42245..42865)
DNA (621bp) protein (207aa)
50S ribosomal protein L5 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RL5_ANADF
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
DolJOral78_scaffold_676_44
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(42939..43253)
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8ILG1_ALIAT
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoca
DolJOral78_scaffold_676_45
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(43253..43621)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=2042517 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
rplN; 50S ribosomal protein L14
DolJOral78_scaffold_676_46
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(43659..43967)
DNA (309bp) protein (103aa)
30S ribosomal protein S17 id=2693041 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=GWA2_Deltaproteobacteria_65_63_curated
30S ribosomal protein S17
DolJOral78_scaffold_676_47
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(43991..44209)
DNA (219bp) protein (73aa)
50S ribosomal protein L29 n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5Z3P6_9FIRM
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_13_Deltaproteobacteria_61_14_curated
50S ribosomal protein L29
DolJOral78_scaffold_676_48
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(44206..44622)
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCH2_9DELT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="En
50S ribosomal protein L16
DolJOral78_scaffold_676_49
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(44641..45279)
DNA (639bp) protein (213aa)
30S ribosomal protein S3 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIB9_HALO1 rbh
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Halia
DolJOral78_scaffold_676_50
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(45290..45634)
DNA (345bp) protein (115aa)
50S ribosomal protein L22 n=2 Tax=Myxococcus RepID=RL22_MYXXD
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystob
rplV; 50S ribosomal protein L22
DolJOral78_scaffold_676_51
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(45637..45918)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CE65_DESTA
SSU ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomo
DolJOral78_scaffold_676_52
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(45921..46751)
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XG81_SORCE
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Cho
rplB; 50S ribosomal protein L2
DolJOral78_scaffold_676_53
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(46779..47078)
DNA (300bp) protein (100aa)
ribosomal protein L25/L23
50S ribosomal protein L23 id=4261282 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=GWC2_Pelobacteraceae_58_13_curated
DolJOral78_scaffold_676_54
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(47075..47698)
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ETD9_SORC5
rplD; hypothetical protein
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangi
DolJOral78_scaffold_676_55
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(47709..48017)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIC6_HALO1
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Hali
DolJOral78_scaffold_676_56
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48020..48121)
DNA (102bp) protein (34aa)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacter
Displaying items 31-56 of 56 in total

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