ggKbase home page

DolJOral78_scaffold_872

Search features with annotation key words

Displaying items 1-30 of 39 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_872_1
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(261..3830)
DNA (3570bp) protein (1190aa)
pyruvate ferredoxin/flavodoxin oxidoreductase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D8FA
pyruvate ferredoxin/flavodoxin oxidoreductase
Tax=BJP_IG2158_Thermoplasmatales_53_16
DolJOral78_scaffold_872_2
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4239..6386)
DNA (2148bp) protein (716aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Imtechella halotolerans K1 RepID=I0WKG8_9FLAO
hppA; membrane-bound proton-translocating pyrophosphatase
Tax=BJP_08E140C01_Flavobacteriales_35_8
DolJOral78_scaffold_872_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6409..6993)
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G610_9FIRM
DolJOral78_scaffold_872_4
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7065..7673)
DNA (609bp) protein (203aa)
50S ribosomal protein L25 id=1852543 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_39_28_curated
50S ribosomal protein L25
DolJOral78_scaffold_872_trna_2
unknown

Not on your lists

comp(7758..7829)
DNA (72bp)
transferRNA
DolJOral78_scaffold_872_5
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7914..8753)
DNA (840bp) protein (280aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=ISPE_CHLCH
DolJOral78_scaffold_872_6
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(8756..11005)
DNA (2250bp) protein (750aa)
capsular polysaccharide biosynthesis protein (EC:2.7.10.2)
Capsular exopolysaccharide family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXK6_9BACT rbh
Capsular exopolysaccharide family {ECO:0000313|EMBL:EHO43130.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
DolJOral78_scaffold_872_7
Pseudoalteromonas sp. OCN003, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11006..11713)
DNA (708bp) protein (236aa)
Putative Capsular polysaccharide biosynthesis, capC n=1 Tax=Pseudoalteromonas haloplanktis (strain TAC 125) RepID=Q3IH98_PSEHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY65441.1}; TaxID=1348114 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
DolJOral78_scaffold_872_8
unknown

Not on your lists

comp(11710..12327)
DNA (618bp) protein (206aa)

This feature has no annotations

DolJOral78_scaffold_872_trna_1
unknown

Not on your lists

comp(12690..12764)
DNA (75bp)
transferRNA
DolJOral78_scaffold_872_9
unknown

Not on your lists

12921..13268
DNA (348bp) protein (116aa)

This feature has no annotations

DolJOral78_scaffold_872_10
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13287..13487)
DNA (201bp) protein (67aa)
Transcriptional regulator, PBSX family n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VU17_9FLAO
Transcriptional regulator, PBSX family {ECO:0000313|EMBL:EPR73561.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Win
transcriptional regulator
DolJOral78_scaffold_872_11
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13498..13899)
DNA (402bp) protein (134aa)
Membrane protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BHI1_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KJF45038.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp.
hypothetical protein
DolJOral78_scaffold_872_12
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(14094..15959)
DNA (1866bp) protein (622aa)
glucose-inhibited division protein A; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=GWF2_WWE1X_40_14_curated
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG id=3898943 bin=GWF2_WWE1_40_14 species=Capnocytophaga canimorsus genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
glucose-inhibited division protein A
DolJOral78_scaffold_872_13
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(15987..18032)
DNA (2046bp) protein (682aa)
Adenylate/guanylate cyclase with Chase sensor id=3898939 bin=GWF2_WWE1_40_14 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
adenylate/guanylate cyclase Tax=GWF2_WWE1X_40_14_curated
adenylate cyclase
DolJOral78_scaffold_872_14
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(18062..18727)
DNA (666bp) protein (222aa)
Putative uncharacterized protein id=4421794 bin=GWF2_WWE1_40_14 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_WWE1_40_14 organism_group=WWE1
hypothetical protein Tax=GWF2_WWE1X_40_14_curated
DolJOral78_scaffold_872_15
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18900..19592
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J3Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28899.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ABC transporter ATP-binding protein
DolJOral78_scaffold_872_16
unknown

Not on your lists

19589..21043
DNA (1455bp) protein (485aa)

This feature has no annotations

DolJOral78_scaffold_872_17
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(21106..22428)
DNA (1323bp) protein (441aa)
LexA DNA-binding protein id=4311281 bin=GWF2_Bacteroidetes_43_63 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77 rbh
LexA DNA-binding protein Tax=GWF2_Bacteroidetes_43_63_curated
LexA DNA-binding protein
DolJOral78_scaffold_872_18
unknown

Not on your lists

comp(22457..23758)
DNA (1302bp) protein (434aa)

This feature has no annotations

DolJOral78_scaffold_872_19
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(24029..25234)
DNA (1206bp) protein (402aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase id=4421795 bin=GWF2_WWE1_40_14 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
DolJOral78_scaffold_872_20
unknown

Not on your lists

comp(25206..25517)
DNA (312bp) protein (104aa)

This feature has no annotations

DolJOral78_scaffold_872_21
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(25531..26097)
DNA (567bp) protein (189aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=GWF2_WWE1X_40_14_curated
guanylate kinase (EC:2.7.4.8)
Guanylate kinase id=4421797 bin=GWF2_WWE1_40_14 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_WWE1_40_14 organism_group=WWE1
DolJOral78_scaffold_872_22
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(26090..26959)
DNA (870bp) protein (290aa)
Putative uncharacterized protein id=4421798 bin=GWF2_WWE1_40_14 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_WWE1_40_14 organism_group=WWE1
YicC domain-containing protein Tax=GWF2_WWE1X_40_14_curated
hypothetical protein
DolJOral78_scaffold_872_23
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(26962..27519)
DNA (558bp) protein (186aa)
Putative uncharacterized protein id=4421799 bin=GWF2_WWE1_40_14 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_WWE1_40_14 organism_group=WWE1
Putative uncharacterized protein Tax=GWF2_WWE1X_40_14_curated
hypothetical protein
DolJOral78_scaffold_872_24
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(27488..27991)
DNA (504bp) protein (168aa)
YrbI family 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=GWF2_WWE1X_40_14_curated
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family id=4421800 bin=GWF2_WWE1_40_14 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
DolJOral78_scaffold_872_25
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(27991..28791)
DNA (801bp) protein (267aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=GWF2_WWE1X_40_14_curated
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase id=4421801 bin=GWF2_WWE1_40_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
DolJOral78_scaffold_872_26
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

29200..30621
DNA (1422bp) protein (474aa)
Chromosomal replication initiator protein DnaA id=3964317 bin=GWF2_WWE1_40_14 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
chromosomal replication initiator protein DnaA Tax=GWF2_WWE1X_40_14_curated
chromosomal replication initiator protein DnaA
DolJOral78_scaffold_872_27
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

30841..31968
DNA (1128bp) protein (376aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta id=3964319 bin=GWF2_WWE1_40_14 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
DNA polymerase III subunit beta Tax=GWF2_WWE1X_40_14_curated
DolJOral78_scaffold_872_28
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

31969..33075
DNA (1107bp) protein (369aa)
DNA replication and repair protein RecF id=3964321 bin=GWF2_WWE1_40_14 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=GWF2_WWE1X_40_14_curated
DNA replication and repair protein RecF
Displaying items 1-30 of 39 in total

View Taxonomy