ggKbase home page

DolJOral78_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 67 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_226_1
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(184..1218)
DNA (1035bp) protein (345aa)
Metallophosphoesterase n=2 Tax=Myroides RepID=H1Z7K8_MYROD
Uncharacterized protein {ECO:0000313|EMBL:EKB08865.1}; TaxID=883155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides [odoratimimus] C
Calcineurin-like phosphoesterase
DolJOral78_scaffold_226_2
unknown

Not on your lists

1620..3485
DNA (1866bp) protein (622aa)

This feature has no annotations

DolJOral78_scaffold_226_3
unknown

Not on your lists

3487..4170
DNA (684bp) protein (228aa)

This feature has no annotations

DolJOral78_scaffold_226_4
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(4378..5613)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037AC5B8
hypothetical protein; K09798 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
sugar deacetylase
DolJOral78_scaffold_226_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5615..6181)
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) Tax=GWF2_Lentisphaerae_50_93_curated
rmlC2; dTDP-4-dehydrorhamnose 3,5-epimerase RmlC (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase id=3267984 bin=GWF2_Lentisphaerae_50_93 species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
DolJOral78_scaffold_226_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6427..7164
DNA (738bp) protein (246aa)
Conserved hypothetical signal peptide protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16285.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
DolJOral78_scaffold_226_7

Not on your lists


7287..7526
DNA (240bp) protein (80aa)
50S ribosomal protein L28 n=2 Tax=Chloroflexus RepID=A9WKB7_CHLAA
Marine sediment metagenome DNA, contig: S01H4_S11943 {ECO:0000313|EMBL:GAG90340.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L28
DolJOral78_scaffold_226_8
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7621..8328)
DNA (708bp) protein (236aa)
Alkyl hydroperoxide reductase id=2922458 bin=GWF2_Planctomycete_41_51 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
alkyl hydroperoxide reductase; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE Tax=GWF2_Planctomycetes_41_51_curated
hypothetical protein
DolJOral78_scaffold_226_9
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8807..10414
DNA (1608bp) protein (536aa)
fumB; fumarate hydratase, class I (EC:4.2.1.2) rbh
Fumarate hydratase, class I {ECO:0000313|EMBL:CAE79990.1}; EC=4.2.1.2 {ECO:0000313|EMBL:CAE79990.1};; TaxID=264462 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibr
Fumarate hydratase, class I n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6ML67_BDEBA rbh
DolJOral78_scaffold_226_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10860..15485
DNA (4626bp) protein (1542aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Y5_GEOUR
two component sigma-54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABQ26503.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacter
DolJOral78_scaffold_226_11
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15540..16199
DNA (660bp) protein (220aa)
kdkA; protein KdkA (EC:2.7.1.-)
KdkA n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QBR5_DESAH
Uncharacterized protein {ECO:0000313|EMBL:KJS32111.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatit
DolJOral78_scaffold_226_12
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16395..18023
DNA (1629bp) protein (543aa)
Putative secreted protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BCU9_ZUNPS rbh
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AKD03700.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
DolJOral78_scaffold_226_13
Candidatus Odyssella thessalonicensis, Candidatus Odyssella, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18039..19286
DNA (1248bp) protein (416aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Candidatus Odyssella thessalonicensis RepID=D9I3B7_9RICK
Putative uncharacterized protein {ECO:0000313|EMBL:ADI50095.1}; Flags: Fragment;; TaxID=84647 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Odyssella.;" source="Can
polyA polymerase/tRNA nucleotidyltransferase family protein
DolJOral78_scaffold_226_14
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19270..20730
DNA (1461bp) protein (487aa)
glutamate--cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase GCS2 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BSY7_9FLAO
Glutamate--cysteine ligase GCS2 {ECO:0000313|EMBL:EHQ01517.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea
DolJOral78_scaffold_226_15
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20913..21884)
DNA (972bp) protein (324aa)
Galanin n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TUT2_MARTH
galanin Tax=GWB2_Bacteroidetes_41_8_curated
galanin
DolJOral78_scaffold_226_16
unknown

Not on your lists

comp(22089..22760)
DNA (672bp) protein (224aa)
hypothetical protein
DolJOral78_scaffold_226_17
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23152..23724)
DNA (573bp) protein (191aa)
UPF0301 protein Hoch_0331 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIU3_HALO1
hypothetical protein
UPF0301 protein Hoch_0331 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Hali
DolJOral78_scaffold_226_18
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23738..24913)
DNA (1176bp) protein (392aa)
aspC3; putative aspartate transaminase AspC3 (EC:2.6.1.1)
Probable aspartate transaminase AspC3 n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z4S7_FLABF
Aminotransferase {ECO:0000313|EMBL:KFF20207.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytop
DolJOral78_scaffold_226_19
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

25135..28419
DNA (3285bp) protein (1095aa)
hypothetical protein Tax=RBG_13_OP8X_37_8_curated
hypothetical protein id=24418766 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
hypothetical protein
DolJOral78_scaffold_226_20
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

28446..28895
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B2F5D9
hypothetical protein Tax=RBG_13_Actinobacteria_55_18_curated
hypothetical protein
DolJOral78_scaffold_226_21
unknown

Not on your lists

28912..30108
DNA (1197bp) protein (399aa)

This feature has no annotations

DolJOral78_scaffold_226_22
unknown

Not on your lists

30202..30876
DNA (675bp) protein (225aa)

This feature has no annotations

DolJOral78_scaffold_226_23
unknown

Not on your lists

31095..31286
DNA (192bp) protein (64aa)

This feature has no annotations

DolJOral78_scaffold_226_24
unknown

Not on your lists

31283..31738
DNA (456bp) protein (152aa)

This feature has no annotations

DolJOral78_scaffold_226_trna_5
unknown

Not on your lists

comp(31911..31984)
DNA (74bp)
transferRNA
DolJOral78_scaffold_226_25
RIFOXYB2_FULL_Desulfobacula_45_6_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32338..32829)
DNA (492bp) protein (164aa)
Single-stranded DNA-binding protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYV2_9DELT
ssb; singel-stranded DNA-binding protein, helix-destabilizing Ssb Tax=RIFOXYB2_FULL_Desulfobacula_45_6_curated
ssb; singel-stranded DNA-binding protein, helix-destabilizing Ssb
DolJOral78_scaffold_226_26
unknown

Not on your lists

comp(33003..33608)
DNA (606bp) protein (202aa)

This feature has no annotations

DolJOral78_scaffold_226_trna_1
unknown

Not on your lists

33739..33821
DNA (83bp)
transferRNA
DolJOral78_scaffold_226_trna_2
unknown

Not on your lists

33828..33901
DNA (74bp)
transferRNA
DolJOral78_scaffold_226_trna_3
unknown

Not on your lists

33914..33986
DNA (73bp)
transferRNA
Displaying items 1-30 of 67 in total

View Taxonomy