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DolJOral78_scaffold_11

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Displaying items 1-30 of 202 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_11_1
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

569..1846
DNA (1278bp) protein (426aa)
Putative exported binding protein transporter component n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYJ6_9RHOB
Putative exported binding protein transporter component {ECO:0000313|EMBL:EEA93227.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovib
sugar ABC transporter periplasmic protein
DolJOral78_scaffold_11_2
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1916..2797
DNA (882bp) protein (294aa)
Putative transmembrane component of transporter n=1 Tax=Ruegeria sp. R11 RepID=B7QXH9_9RHOB
Putative transmembrane component of transporter {ECO:0000313|EMBL:EEB71778.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" sourc
amyD; starch degradation products transport system permease protein AmyD
DolJOral78_scaffold_11_3
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2794..3606
DNA (813bp) protein (271aa)
L-arabinose transport system permease protein AraQ n=2 Tax=Pseudovibrio RepID=G8PVK4_PSEUV
araQ; L-arabinose transport system permease AraQ
ABC transporter, membrane spanning protein {ECO:0000313|EMBL:EEA93444.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source
DolJOral78_scaffold_11_4
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3676..4665
DNA (990bp) protein (330aa)
Alanine racemase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QZ93_9CLOT
Alanine racemase {ECO:0000313|EMBL:EPR09403.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
LacI family transcriptional regulator
DolJOral78_scaffold_11_5
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

4706..6718
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHJ6_THET1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ43217.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
DolJOral78_scaffold_11_6
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(6832..8268)
DNA (1437bp) protein (479aa)
ATP-dependent protease Clp, ATPase subunit n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K094_9BACT
ATP-dependent protease Clp, ATPase subunit {ECO:0000313|EMBL:CCG92913.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Met
clpX; ATP-dependent protease Clp, ATPase subunit
DolJOral78_scaffold_11_7
bacterium UASB270, Bacteria

Not on your lists

8815..9267
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK60417.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
DolJOral78_scaffold_11_8
bacterium UASB14, Bacteria

Not on your lists

9321..11951
DNA (2631bp) protein (877aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:GAK52127.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
ATP-dependent DNA helicase RecG id=1703066 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
ATP-dependent DNA helicase RecG
DolJOral78_scaffold_11_9
bacterium UASB270, Bacteria

Not on your lists

comp(12016..14148)
DNA (2133bp) protein (711aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=149996
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase id=4409361 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
DolJOral78_scaffold_11_10
bacterium UASB270, Bacteria

Not on your lists


comp(14271..14540)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM93_DESK7
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
30S ribosomal protein S15
DolJOral78_scaffold_11_11
unknown

Not on your lists

comp(14623..14745)
DNA (123bp) protein (41aa)

This feature has no annotations

DolJOral78_scaffold_11_12
bacterium UASB14, Bacteria

Not on your lists

comp(14753..15679)
DNA (927bp) protein (309aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
truB; tRNA pseudouridine synthase B (EC:5.4.99.-)
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B3H5_9CLOT
DolJOral78_scaffold_11_13
unknown

Not on your lists

comp(15654..15839)
DNA (186bp) protein (62aa)

This feature has no annotations

DolJOral78_scaffold_11_14
bacterium UASB270, Bacteria

Not on your lists

16007..17773
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000370F55E rbh
Radical SAM domain protein {ECO:0000313|EMBL:GAK57764.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
radical SAM family protein
DolJOral78_scaffold_11_15
bacterium UASB14, Bacteria

Not on your lists

comp(17856..18428)
DNA (573bp) protein (191aa)
Phosphoglycerate mutase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GL61_9BACT
Alpha-ribazole phosphatase {ECO:0000313|EMBL:GAK52365.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
alpha-ribazole phosphatase
DolJOral78_scaffold_11_16
bacterium UASB14, Bacteria

Not on your lists

comp(18431..19213)
DNA (783bp) protein (261aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
Cobalamin synthase n=1 Tax=uncultured bacterium RepID=K2E3F2_9BACT
cobalamin synthase
DolJOral78_scaffold_11_17
bacterium UASB14, Bacteria

Not on your lists

comp(19210..20259)
DNA (1050bp) protein (350aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ58_CHIPD
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
DolJOral78_scaffold_11_18
bacterium UASB270, Bacteria

Not on your lists

comp(20300..21568)
DNA (1269bp) protein (423aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK58081.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
DolJOral78_scaffold_11_19
bacterium UASB270, Bacteria

Not on your lists

comp(21720..22130)
DNA (411bp) protein (137aa)
Molybdopterin-converting factor subunit 2 (Molybdopterin synthase subunit 2) (MPT synthase subunit 2) (Molybdenum cofactor biosynthesis protein E) (Molybdopterin-converting factor large subunit) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEV7_9BACT
Molybdopterin-converting factor subunit 2, MPT synthase {ECO:0000313|EMBL:GAK58002.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
moaE; molybdopterin-converting factor subunit 2 (Molybdopterin synthase subunit 2) (MPT synthase subunit 2) (Molybdenum cofactor biosynthesis protein E) (Molybdopterin-converting factor large subunit)
DolJOral78_scaffold_11_20
bacterium UASB270, Bacteria

Not on your lists

comp(22135..22434)
DNA (300bp) protein (100aa)
Molybdopterin biosynthesis protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BI42_9GAMM
Molybdopterin converting factor, subunit 1 {ECO:0000313|EMBL:GAK58003.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
DolJOral78_scaffold_11_21
bacterium UASB14, Bacteria

Not on your lists

comp(22578..24137)
DNA (1560bp) protein (520aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HYU9_CALAS
guaA; GMP synthase
DolJOral78_scaffold_11_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(24206..24991)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXT1_HALOH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
DolJOral78_scaffold_11_23
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25110..25604)
DNA (495bp) protein (165aa)
Predicted flavodoxin n=2 Tax=Clostridium RepID=D8GIU4_CLOLD
Flavodoxin {ECO:0000313|EMBL:KJF26696.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
DolJOral78_scaffold_11_24
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25681..26475)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBT5_9BACT id=45372 bin=ACD39 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Uncharacterized protein {ECO:0000313|EMBL:KHD04257.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
DolJOral78_scaffold_11_25
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26632..27195)
DNA (564bp) protein (188aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U9D0_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EKQ53344.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methan
type 11 methyltransferase
DolJOral78_scaffold_11_26
unknown

Not on your lists

comp(27774..27977)
DNA (204bp) protein (68aa)

This feature has no annotations

DolJOral78_scaffold_11_27
Treponema putidum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28416..29225)
DNA (810bp) protein (270aa)
Leucine carboxyl methyltransferase n=2 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2LDQ6_TRESO
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AIN93031.1}; TaxID=221027 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema putidum.;"
DolJOral78_scaffold_11_28
unknown

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comp(29726..30163)
DNA (438bp) protein (146aa)

This feature has no annotations

DolJOral78_scaffold_11_29
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(30809..32710)
DNA (1902bp) protein (634aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IDU3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO80664.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscill
hypothetical protein
DolJOral78_scaffold_11_30
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(32760..33914)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00036F00CA
putative exported carboxyl-terminal protease protein
Putative exported carboxyl-terminal protease protein {ECO:0000313|EMBL:AIE85874.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;
Displaying items 1-30 of 202 in total

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