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DolJOral78_scaffold_342

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Displaying items 1-30 of 65 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_342_1
unknown

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3..104
DNA (102bp) protein (34aa)

This feature has no annotations

DolJOral78_scaffold_342_2
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1139..1717
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U6S1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV19947.1}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source
hypothetical protein
DolJOral78_scaffold_342_3

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comp(2252..2515)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI0003677863
Uncharacterized protein {ECO:0000313|EMBL:KKL96605.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DolJOral78_scaffold_342_4
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3320..3646)
DNA (327bp) protein (109aa)
Hpt domain protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDF0_DESPD
Hpt domain-containing protein
Hpt domain protein {ECO:0000313|EMBL:ADW17956.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propi
DolJOral78_scaffold_342_5
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3648..4295)
DNA (648bp) protein (216aa)
Translation factor SUA5 n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7T6_DESSD
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
translation factor SUA5
DolJOral78_scaffold_342_6
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4292..6070)
DNA (1779bp) protein (593aa)
phosphoribosylamine/glycine ligase (EC:4.1.1.21 6.3.4.13)
Phosphoribosylamine/glycine ligase {ECO:0000313|EMBL:ADW17958.1}; EC=4.1.1.21 {ECO:0000313|EMBL:ADW17958.1};; EC=6.3.4.13 {ECO:0000313|EMBL:ADW17958.1};; TaxID=577650 species="Bacteria; Proteobacteria
Phosphoribosylamine--glycine ligase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDF2_DESPD
DolJOral78_scaffold_342_7
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6546..7133
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDF3_DESPD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADW17959.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source=
DolJOral78_scaffold_342_8
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7242..7727)
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDF4_DESPD
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=577650 species="Bacteria
DolJOral78_scaffold_342_9
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7768..9096)
DNA (1329bp) protein (443aa)
Uncharacterized protein {ECO:0000313|EMBL:KJR96796.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
Putative uncharacterized protein id=2041797 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
DolJOral78_scaffold_342_10
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9114..10301)
DNA (1188bp) protein (396aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDF5_DESPD rbh
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ADW17961.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="
DolJOral78_scaffold_342_11
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10359..11345)
DNA (987bp) protein (329aa)
RNA polymerase, sigma 32 subunit, RpoH n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDF6_DESPD rbh
RNA polymerase sigma 32 subunit RpoH
RNA polymerase, sigma 32 subunit, RpoH {ECO:0000313|EMBL:ADW17962.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source=
DolJOral78_scaffold_342_12
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12084..13877
DNA (1794bp) protein (598aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDF7_DESPD rbh
GTP-binding protein LepA
DolJOral78_scaffold_342_13
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13905..14510)
DNA (606bp) protein (202aa)
Probable GTP-binding protein EngB n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDF8_DESPD
ribosome biogenesis GTP-binding protein YsxC
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="
DolJOral78_scaffold_342_14
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14532..15404)
DNA (873bp) protein (291aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDF9_DESPD
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; E
DolJOral78_scaffold_342_15
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15443..15826)
DNA (384bp) protein (128aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDG0_DESPD
DolJOral78_scaffold_342_16
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16210..16650
DNA (441bp) protein (147aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDG1_DESPD
FKBP-type peptidylprolyl isomerase
DolJOral78_scaffold_342_17
unknown

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16714..16923
DNA (210bp) protein (70aa)

This feature has no annotations

DolJOral78_scaffold_342_18
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17122..19995
DNA (2874bp) protein (958aa)
CheA signal transduction histidine kinase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDG2_DESPD rbh
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase {ECO:0000313|EMBL:ADW17968.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" sour
DolJOral78_scaffold_342_19
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20356..20823
DNA (468bp) protein (156aa)
CheW protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDG4_DESPD
CheW protein
CheW protein {ECO:0000313|EMBL:ADW17970.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus
DolJOral78_scaffold_342_20
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20762..21985
DNA (1224bp) protein (408aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=577650 species="Bacteria; Proteobacteria; Deltap
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDG5_DESPD
response regulator receiver modulated CheB methylesterase
DolJOral78_scaffold_342_21
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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22088..22924
DNA (837bp) protein (279aa)
Methylase of chemotaxis methyl-accepting protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NJ29_DESSD
methylase of chemotaxis methyl-accepting protein
Methylase of chemotaxis methyl-accepting protein {ECO:0000313|EMBL:AGF79544.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.
DolJOral78_scaffold_342_22
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22986..23552
DNA (567bp) protein (189aa)
Response regulator receiver protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDG8_DESPD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADW17974.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="De
DolJOral78_scaffold_342_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23643..24044
DNA (402bp) protein (134aa)
protein mazG Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
tetrapyrrole methyltransferase and pyrophosphatase domain-containing protein
Putative uncharacterized protein id=1882531 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolJOral78_scaffold_342_24
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24165..24593
DNA (429bp) protein (143aa)
30S ribosomal protein S6 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDH0_DESPD
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Des
DolJOral78_scaffold_342_25
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24636..24875
DNA (240bp) protein (80aa)
30S ribosomal protein S18 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDH1_DESPD
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfob
DolJOral78_scaffold_342_26
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24894..25358
DNA (465bp) protein (155aa)
50S ribosomal protein L9 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDH3_DESPD
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobu
DolJOral78_scaffold_342_27
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25554..26942
DNA (1389bp) protein (463aa)
Replicative DNA helicase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDH4_DESPD rbh
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:ADW17980.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
DolJOral78_scaffold_342_28
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26986..29466
DNA (2481bp) protein (827aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=577650 species="Bacteria; Proteob
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDW0_DESPD rbh
DolJOral78_scaffold_342_29
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29641..30198
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDW1_DESPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW17982.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
DolJOral78_scaffold_342_30
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30636..31622
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desul
tRNA-dihydrouridine synthase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RDW2_DESPD
tRNA-U20-dihydrouridine synthase
Displaying items 1-30 of 65 in total

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