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DolJOral78_scaffold_2213

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Displaying items 1-30 of 90 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2213_1
unknown

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2..178
DNA (177bp) protein (59aa)

This feature has no annotations

DolJOral78_scaffold_2213_2
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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829..1020
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28TP4_JANSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD53918.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (str
DolJOral78_scaffold_2213_3
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1283..1468
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:ABD53918.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (str
DolJOral78_scaffold_2213_4
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1594..2565
DNA (972bp) protein (324aa)
Type I secretion target repeat protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SL99_9RHOB rbh
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:KEJ90917.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="S
hypothetical protein
DolJOral78_scaffold_2213_5
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2720..4006
DNA (1287bp) protein (429aa)
Crotonyl-CoA reductase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VE63_9RHOB
Crotonyl-CoA reductase {ECO:0000313|EMBL:KGB81201.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22
crotonyl-CoA reductase
DolJOral78_scaffold_2213_6
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4094..4483)
DNA (390bp) protein (130aa)
msrB2; peptide methionine sulfoxide reductase (EC:1.8.4.12)
Methionine sulfoxide reductase B n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPJ7_9RHOB
Methionine sulfoxide reductase B {ECO:0000313|EMBL:ESW62077.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobac
DolJOral78_scaffold_2213_7
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4561..5283
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K1X7_9RHOB
Ornithine-acyl-ACP N-acyltransferase {ECO:0000313|EMBL:ETW14342.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Rosei
putative acyl-CoA N-acyltransferases (Nat) superfamily protein
DolJOral78_scaffold_2213_8
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5346..7181
DNA (1836bp) protein (612aa)
ABC transporter, ATP-binding protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q164D6_ROSDO
Elongation factor 3 {ECO:0000313|EMBL:KGB82963.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
ABC transporter ATP-binding protein
DolJOral78_scaffold_2213_9
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7384..8361
DNA (978bp) protein (326aa)
Outer membrane efflux protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B3E5_9RHOB
Outer membrane efflux protein {ECO:0000313|EMBL:EDZ41053.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacteriu
outer membrane efflux protein
DolJOral78_scaffold_2213_10
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8300..8650
DNA (351bp) protein (117aa)
transporter n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B57572
Transporter {ECO:0000313|EMBL:KFI34029.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.
TolC family type I secretion outer membrane protein
DolJOral78_scaffold_2213_11
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8743..9753
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JEE3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KAJ02567.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter med
hypothetical protein
DolJOral78_scaffold_2213_12
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10231..10734
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AXG3_9RHOB
Diacylglyceryl transferase {ECO:0000313|EMBL:KGB83198.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp.
hypothetical protein
DolJOral78_scaffold_2213_13
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10929..11390
DNA (462bp) protein (154aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EXF1_9RHOB
pyrroline-5-carboxylate reductase
DolJOral78_scaffold_2213_14
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11387..11734
DNA (348bp) protein (116aa)
Chaperonin csaA n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FM86_PELBH
Chaperonin csaA {ECO:0000313|EMBL:EAU45239.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (str
secretion chaperone CsaA
DolJOral78_scaffold_2213_15
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11734..12690
DNA (957bp) protein (319aa)
putative glycerate dehydrogenase (EC:1.1.1.-)
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SRB3_9RHOB
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KDB05359.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimon
DolJOral78_scaffold_2213_16
unknown

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comp(12603..13223)
DNA (621bp) protein (207aa)

This feature has no annotations

DolJOral78_scaffold_2213_trna_3
unknown

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comp(12937..13008)
DNA (72bp)
transferRNA
DolJOral78_scaffold_2213_17
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13201..14754)
DNA (1554bp) protein (518aa)
Helicase, ATP-dependent, putative n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SKF9_9RHOB
Helicase, ATP-dependent, putative {ECO:0000313|EMBL:EAP77840.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovari
ATPase AAA
DolJOral78_scaffold_2213_18
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14826..16301)
DNA (1476bp) protein (492aa)
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RIK9_9RHOB
Tax=BJP_IG2158_Rhodobacterales_69_12
DolJOral78_scaffold_2213_19
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16377..17057)
DNA (681bp) protein (227aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobact
Lipoprotein releasing system ATP-binding protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SC30_9RHOB
ABC transporter ATP-binding protein
DolJOral78_scaffold_2213_20
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17050..18336)
DNA (1287bp) protein (429aa)
Lipoprotein releasing system transmembrane protein LolE n=1 Tax=Roseovarius sp. TM1035 RepID=A6DXK8_9RHOB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD12205.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="C
lipoprotein releasing system transmembrane protein
DolJOral78_scaffold_2213_21
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18361..19698)
DNA (1338bp) protein (446aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
prolyl-tRNA synthetase (EC:6.1.1.15)
Prolyl-tRNA synthetase n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JQC8_9RHOB rbh
DolJOral78_scaffold_2213_22
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19937..21022
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FQD4_9RHOB
Membrane protein {ECO:0000313|EMBL:KEJ98212.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudoni
hypothetical protein
DolJOral78_scaffold_2213_23
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21026..21709
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1F0_9RHOB
Chromosomal replication initiator, DnaA {ECO:0000313|EMBL:KDB02450.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source=
hypothetical protein
DolJOral78_scaffold_2213_24
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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21770..23194
DNA (1425bp) protein (475aa)
Phosphatase, Ppx/GppA family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LUD7_RUEPO
phosphatase, Ppx/GppA family
Phosphatase, Ppx/GppA family {ECO:0000313|EMBL:AAV94417.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroy
DolJOral78_scaffold_2213_25
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23208..24581)
DNA (1374bp) protein (458aa)
D-lactate dehydrogenase [cytochrome] 1 {ECO:0000313|EMBL:BAQ70060.1}; EC=1.1.2.4 {ECO:0000313|EMBL:BAQ70060.1};; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rh
Putative D-lactate dehydrogenase n=1 Tax=Octadecabacter antarcticus 307 RepID=M9R3W6_9RHOB rbh
putative D-lactate dehydrogenase
DolJOral78_scaffold_2213_26
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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24702..26255
DNA (1554bp) protein (518aa)
Putative chloride channel protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LS53_DINSH
putative chloride channel protein
Putative chloride channel protein {ECO:0000313|EMBL:ABV94146.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dino
DolJOral78_scaffold_2213_27
Candidatus Pelagibacter sp. HTCC7211, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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26293..27444
DNA (1152bp) protein (384aa)
L-lactate dehydrogenase {ECO:0000313|EMBL:EDZ60465.1}; EC=1.1.2.3 {ECO:0000313|EMBL:EDZ60465.1};; TaxID=439493 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacterace
L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3)
lactate dehydrogenase n=1 Tax=alpha proteobacterium SCGC AAA536-K22 RepID=UPI0003B38AA3 rbh
DolJOral78_scaffold_2213_28
endosymbiont of Ridgeia piscesae, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28015..29490)
DNA (1476bp) protein (492aa)
MORN repeat protein n=1 Tax=endosymbiont of Ridgeia piscesae RepID=D2CL14_9GAMM rbh
MORN repeat protein {ECO:0000313|EMBL:ABY79063.1}; TaxID=54398 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Ridgeia piscesae.;"
MORN repeat-containing protein
DolJOral78_scaffold_2213_29
endosymbiont of Ridgeia piscesae, Gammaproteobacteria, Proteobacteria, Bacteria

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29628..31286
DNA (1659bp) protein (553aa)
nadE; glutamine-dependent NAD(+) synthetase (EC:6.3.5.1)
NAD(+) synthase n=1 Tax=endosymbiont of Ridgeia piscesae RepID=D2CL13_9GAMM rbh
NAD(+) synthase {ECO:0000313|EMBL:ABY79062.1}; TaxID=54398 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Ridgeia piscesae.;"
Displaying items 1-30 of 90 in total

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