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DolJOral78_scaffold_561

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Displaying items 1-30 of 117 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_561_1
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2256)
DNA (2256bp) protein (752aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Signal transduction histidine kinase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4F0B0_9RHOB
signal transduction histidine kinase
DolJOral78_scaffold_561_2
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2258..3283
DNA (1026bp) protein (342aa)
Periplasmic sensory protein associated with the TorRS two-component regulatory system n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4F0B1_9RHOB
Periplasmic sensory protein associated with the TorRS two-component regulatory system {ECO:0000313|EMBL:EBA14734.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterale
TMAO reductase system periplasmic protein TorT
DolJOral78_scaffold_561_3
unknown

Not on your lists

comp(3324..3731)
DNA (408bp) protein (136aa)

This feature has no annotations

DolJOral78_scaffold_561_4
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3885..4391)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CUI9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KIC51752.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. A
hypothetical protein
DolJOral78_scaffold_561_5
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4543..5433)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JYS3_9RHOB rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EKE70420.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Ce
LysR family transcriptional regulator rbh
DolJOral78_scaffold_561_6
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5536..6732
DNA (1197bp) protein (399aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGI67928.1}; EC=1.3.99.- {ECO:0000313|EMBL:AGI67928.1};; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
Acyl-CoA dehydrogenase n=1 Tax=Octadecabacter antarcticus 307 RepID=B5IYB4_9RHOB rbh
DolJOral78_scaffold_561_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6735..7886
DNA (1152bp) protein (384aa)
Family III (CaiB/BaiF) CoA-transferase n=2 Tax=Rhizobium RepID=L0LU67_RHITR rbh
family III (CaiB/BaiF) CoA-transferase rbh
Family III (CaiB/BaiF) CoA-transferase {ECO:0000313|EMBL:ENN83946.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
DolJOral78_scaffold_561_8
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7896..8495)
DNA (600bp) protein (200aa)
Transcription regulator, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16BY2_ROSDO
XRE family transcriptional regulator {ECO:0000313|EMBL:KGJ22944.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Parac
transcriptional regulator
DolJOral78_scaffold_561_9
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8600..9892
DNA (1293bp) protein (431aa)
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:KFI32914.1}; EC=2.6.1.19 {ECO:0000313|EMBL:KFI32914.1};; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodob
4-aminobutyrate aminotransferase apoenzyme n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28MS5_JANSC
4-aminobutyrate aminotransferase
DolJOral78_scaffold_561_10
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10001..11431
DNA (1431bp) protein (477aa)
5-oxovalerate dehydrogenase, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16BY0_ROSDO rbh
cpnE; 5-oxovalerate dehydrogenase rbh
5-oxovalerate dehydrogenase, putative {ECO:0000313|EMBL:ABG30513.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Rose
DolJOral78_scaffold_561_11

Not on your lists

comp(11717..12022)
DNA (306bp) protein (102aa)
CRISPR-associated protein Cas2 n=1 Tax=Loktanella vestfoldensis RepID=UPI000376403E
Uncharacterized protein {ECO:0000313|EMBL:KKM19238.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CRISPR-associated protein Cas2
DolJOral78_scaffold_561_12
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12058..12969)
DNA (912bp) protein (304aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
CRISPR-associated protein Cas1 n=1 Tax=Loktanella vestfoldensis RepID=UPI0003640C35
CRISPR-associated protein Cas1
DolJOral78_scaffold_561_13

Not on your lists

comp(13051..14289)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI00037015CF
Uncharacterized protein {ECO:0000313|EMBL:KKL84911.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CRISPR-associated protein
DolJOral78_scaffold_561_14
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14276..16405)
DNA (2130bp) protein (710aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacteral
CRISPR-associated protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LN05_DINSH
CRISPR-associated protein
DolJOral78_scaffold_561_15
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17008..17433
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ahrensia sp. R2A130 RepID=E0MJ88_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EFL90799.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;
hypothetical protein
DolJOral78_scaffold_561_16
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17430..18215
DNA (786bp) protein (262aa)
fhuC; cobalamin/Fe3+-siderophores ABC transporter protein (EC:3.6.3.34)
ABC-type cobalamin/Fe3+-siderophores transport system protein {ECO:0000313|EMBL:ABV92306.1}; EC=3.6.3.34 {ECO:0000313|EMBL:ABV92306.1};; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobact
ABC-type cobalamin/Fe3+-siderophores transport system protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LPI3_DINSH rbh
DolJOral78_scaffold_561_17
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18228..19160
DNA (933bp) protein (311aa)
Periplasmic binding protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R3M8_9RHOB
Periplasmic binding protein {ECO:0000313|EMBL:EEE43280.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexan
ABC-type Fe3+-hydroxamate transport system, periplasmic component
DolJOral78_scaffold_561_18
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19165..20193
DNA (1029bp) protein (343aa)
Transport system permease protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EUL2_9RHOB rbh
Transport system permease protein {ECO:0000313|EMBL:EBA16793.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobac
ABC transporter permease protein
DolJOral78_scaffold_561_19
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20374..20970
DNA (597bp) protein (199aa)
Hemolysin-III family membrane protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ER42_9RHOB
Hemolysin {ECO:0000313|EMBL:KAJ02896.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
hypothetical protein
DolJOral78_scaffold_561_20
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21001..21498)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558D65
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:KHD12316.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source
hypothetical protein
DolJOral78_scaffold_561_21
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21508..22242)
DNA (735bp) protein (245aa)
Flagellar L-ring protein FlgH n=1 Tax=Rhodobacter capsulatus B6 RepID=V8GQN1_RHOCA rbh
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteo
flgH; flagellar L-ring protein FlgH
DolJOral78_scaffold_561_22
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22261..22680)
DNA (420bp) protein (140aa)
Flagellar basal-body P-ring formation protein FlgA n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LWX6_RUEPO
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;"
flgA; flagellar basal-body P-ring formation protein FlgA
DolJOral78_scaffold_561_23
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22680..23465)
DNA (786bp) protein (262aa)
Flagellar basal body rod protein FlgG n=1 Tax=Celeribacter baekdonensis B30 RepID=K2KBF3_9RHOB rbh
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:KHD12313.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candi
flgG; flagellar basal body rod protein FlgG
DolJOral78_scaffold_561_24
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23484..24200)
DNA (717bp) protein (239aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX65_9RHOB rbh
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:KGB83622.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhod
flgF; flagellar basal body rod protein FlgF
DolJOral78_scaffold_561_25
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24204..24470)
DNA (267bp) protein (89aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DF52_9RHOB
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:KGM49762.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceani
Flagellar biosynthesis protein FliQ
DolJOral78_scaffold_561_26
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24470..24763)
DNA (294bp) protein (98aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JHQ7_9RHOB
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
fliE; flagellar hook-basal body protein FliE
DolJOral78_scaffold_561_27
unknown

Not on your lists

24813..25043
DNA (231bp) protein (77aa)

This feature has no annotations

DolJOral78_scaffold_561_28
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24976..25329)
DNA (354bp) protein (118aa)
Flagellar basal-body rod protein FlgB n=1 Tax=Roseovarius sp. TM1035 RepID=A6E1H2_9RHOB
flgB; flagellar basal-body rod protein; FlgB
Tax=BJP_08E140C01_Roseovarius_63_250
DolJOral78_scaffold_561_29
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25415..26752
DNA (1338bp) protein (446aa)
fliI; flagellar protein export ATPase FliI (EC:3.6.3.14)
ATPase, FliI/YscN family n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX70_9RHOB rbh
ATP synthase {ECO:0000313|EMBL:KDB02692.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
DolJOral78_scaffold_561_30
unknown

Not on your lists

27277..27921
DNA (645bp) protein (215aa)

This feature has no annotations

Displaying items 1-30 of 117 in total

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