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DolJOral78_scaffold_961

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_961_1
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..161
DNA (159bp) protein (53aa)
hypothetical protein, partial n=1 Tax=alpha proteobacterium L41A RepID=UPI0003683CD7
Uncharacterized protein {ECO:0000313|EMBL:KJC50914.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
ISBm1, transposase orfB
DolJOral78_scaffold_961_2
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230..1054)
DNA (825bp) protein (275aa)
Membrane protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQX8_RUEPO
Membrane protein {ECO:0000313|EMBL:KIC42263.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;"
membrane protein
DolJOral78_scaffold_961_3
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1082..2089)
DNA (1008bp) protein (336aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodob
dusA; tRNA-dihydrouridine synthase A (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E8E0_9RHOB
DolJOral78_scaffold_961_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2447..3631)
DNA (1185bp) protein (395aa)
Branched-chain amino acid ABC transporter, periplasmic binding protein, putative n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EEF9_9RHOB rbh
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
branched-chain amino acid ABC transporter substrate-binding protein
DolJOral78_scaffold_961_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3661..4713)
DNA (1053bp) protein (351aa)
Branched-chain amino acid ABC transporter, permease protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q162M4_ROSDO rbh
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
branched-chain amino acid ABC transporter permease
DolJOral78_scaffold_961_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4717..5625)
DNA (909bp) protein (303aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q162M5_ROSDO rbh
branched-chain amino acid ABC transporter permease Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
branched-chain amino acid ABC transporter permease
DolJOral78_scaffold_961_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5628..6347)
DNA (720bp) protein (240aa)
Branched chain amino acid ABC transporter, ATP-binding protein, putative n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EB52_9RHOB rbh
branched chain amino acid ABC transporter ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
branched chain amino acid ABC transporter ATP-binding protein
DolJOral78_scaffold_961_8
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6347..7099)
DNA (753bp) protein (251aa)
Branched-chain amino acid ABC transporter, ATP-binding protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q162M7_ROSDO rbh
branched-chain amino acid ABC transporter ATP-binding protein rbh
Branched-chain amino acid ABC transporter, ATP-binding protein, putative {ECO:0000313|EMBL:ABG33066.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacte
DolJOral78_scaffold_961_9
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7233..9311)
DNA (2079bp) protein (693aa)
N-methylhydantoinase A/acetone carboxylase, beta subunit {ECO:0000313|EMBL:AKH98752.1}; EC=3.5.2.14 {ECO:0000313|EMBL:AKH98752.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAC8_PARDP rbh
DolJOral78_scaffold_961_10
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9339..11084)
DNA (1746bp) protein (582aa)
N-methylhydantoinase B/acetone carboxylase, alpha subunit {ECO:0000313|EMBL:AKH98751.1}; EC=3.5.2.14 {ECO:0000313|EMBL:AKH98751.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteri
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAC9_PARDP rbh
DolJOral78_scaffold_961_11
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11281..12240
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A0W4_9BACT rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AKH98750.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source
helix-turn-helix domain-containing protein
DolJOral78_scaffold_961_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12904..13092
DNA (189bp) protein (63aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUR3_ACCPU
Aldehyde-activating protein {ECO:0000313|EMBL:KJB97111.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella
glutathione-dependent formaldehyde-activating protein
DolJOral78_scaffold_961_13
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13316..14965)
DNA (1650bp) protein (550aa)
UPI0003D6A5ED related cluster n=1 Tax=unknown RepID=UPI0003D6A5ED
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1577896 spec
groEL; molecular chaperone GroEL
DolJOral78_scaffold_961_14
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15010..15297)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=CH10_DINSH
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1454373 spec
chaperonin 10 Kd subunit
DolJOral78_scaffold_961_15
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15636..16307)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QMA1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KAJ54840.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium m
hypothetical protein
DolJOral78_scaffold_961_16
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16462..17382
DNA (921bp) protein (307aa)
ppaC; inorganic pyrophosphatase, manganese-dependent (EC:3.6.1.1)
Inorganic pyrophosphatase, manganese-dependent n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LNQ6_RUEPO
Inorganic pyrophosphatase {ECO:0000313|EMBL:KGM48210.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 2
DolJOral78_scaffold_961_17
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17461..18333
DNA (873bp) protein (291aa)
HAD superfamily protein involved in N-acetyl-glucosamine catabolism n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RRN7_9RHOB
HAD superfamily protein involved in N-acetyl-glucosamine catabolism {ECO:0000313|EMBL:EPX80700.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
hypothetical protein, HAD family hydrolase
DolJOral78_scaffold_961_18
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18355..18792
DNA (438bp) protein (146aa)
MaoC family dehydratase n=1 Tax=Rhodobacter capsulatus B6 RepID=V8H6R7_RHOCA
Dehydratase {ECO:0000313|EMBL:KEP70997.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianensis.;"
MaoC-like dehydratase
DolJOral78_scaffold_961_19
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18808..19746
DNA (939bp) protein (313aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=351016 species="Bacteria; Proteobacter
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FNG7_9RHOB
DolJOral78_scaffold_961_20
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19739..20230
DNA (492bp) protein (164aa)
UPF0260 protein thalar_00917 n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QLT0_9RHOB
UPF0260 protein JT55_03460 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum
hypothetical protein
DolJOral78_scaffold_961_21
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20230..21279
DNA (1050bp) protein (350aa)
L-threonine aldolase, low-specificity, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LNP7_RUEPO rbh
L-threonine aldolase, low-specificity, putative
L-threonine aldolase, low-specificity, putative {ECO:0000313|EMBL:AAV96391.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" sourc
DolJOral78_scaffold_961_22
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21289..21828
DNA (540bp) protein (180aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=39858
Putative phosphatidylglycerophosphatase A n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LKV6_DINSH
putative phosphatidylglycerophosphatase A
DolJOral78_scaffold_961_23
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21825..22307
DNA (483bp) protein (161aa)
Competence/damage inducible protein CinA n=1 Tax=Citreicella sp. 357 RepID=I1AR49_9RHOB
CinA-like protein
Tax=BJP_IG2158_Rhodobacterales_64_37
DolJOral78_scaffold_961_24
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22401..23687
DNA (1287bp) protein (429aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:EET46727.1}; EC=1.1.1.3 {ECO:0000313|EMBL:EET46727.1};; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DA20_9RHOB rbh
DolJOral78_scaffold_961_25
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23715..24281
DNA (567bp) protein (189aa)
Isochorismatase hydrolase n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28MZ4_JANSC
Isochorismatase {ECO:0000313|EMBL:KDB03261.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17
isochorismatase hydrolase
DolJOral78_scaffold_961_26
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24274..26016
DNA (1743bp) protein (581aa)
Putative single-stranded-DNA-specific exonuclease n=1 Tax=Octadecabacter antarcticus 307 RepID=M9R2D6_9RHOB
Exonuclease RecJ {ECO:0000313|EMBL:KGM89035.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM
putative single-stranded-DNA-specific exonuclease
DolJOral78_scaffold_961_trna_1
unknown

Not on your lists

26113..26184
DNA (72bp)
transferRNA
DolJOral78_scaffold_961_27
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26219..27283)
DNA (1065bp) protein (355aa)
Phage integrase family protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WQS1_RHOS5 rbh
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ABP69735.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter
DolJOral78_scaffold_961_28
unknown

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comp(27280..27465)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00036915B8
DolJOral78_scaffold_961_29

Not on your lists

27756..28166
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X6R4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN69511.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying items 1-30 of 39 in total

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