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DolJOral78_scaffold_5665

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_5665_1
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..135)
DNA (135bp) protein (45aa)
UPI0003D6CC35 related cluster n=1 Tax=unknown RepID=UPI0003D6CC35
Solute-binding family 7 protein {ECO:0000313|EMBL:KCV83439.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibac
ABC transporter substrate-binding protein
DolJOral78_scaffold_5665_2
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(378..1370)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7F3A1_PHAIB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFO92865.1}; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter inhibe
DolJOral78_scaffold_5665_3
unknown

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comp(1372..1536)
DNA (165bp) protein (55aa)

This feature has no annotations

DolJOral78_scaffold_5665_4
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1883..4174)
DNA (2292bp) protein (764aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI00025590F5
Uncharacterized protein {ECO:0000313|EMBL:KGB81891.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI2
hypothetical protein
DolJOral78_scaffold_5665_5
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4443..5000)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E2C6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEP68452.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianens
hypothetical protein
DolJOral78_scaffold_5665_6
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(5238..5819)
DNA (582bp) protein (194aa)
Methyltransferase type 12 n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V0M6_ARCNC
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ADG93838.1}; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter
DolJOral78_scaffold_5665_7
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5836..7413)
DNA (1578bp) protein (526aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=644107 species="Bacteria; Proteobac
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CPL2_9RHOB
DolJOral78_scaffold_5665_8
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7538..7960
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LW90_RUEPO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV93770.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
DolJOral78_scaffold_5665_9
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8302..9804)
DNA (1503bp) protein (501aa)
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family (EC:3.4.16.4 3.4.21.-)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002FED40F
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KGB81895.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodov
DolJOral78_scaffold_5665_10
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10033..11283
DNA (1251bp) protein (417aa)
Tryptophanase; EC=4.1.99.1;; L-tryptophan indole-lyase; Short=TNase;; TaxID=1061 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodo
tnaA; tryptophanase (EC:4.1.99.1)
Tryptophanase n=1 Tax=Rhodobacter capsulatus RepID=TNAA_RHOCA
DolJOral78_scaffold_5665_11
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11495..11974)
DNA (480bp) protein (160aa)
Acetyltransferase, GNAT family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LNZ7_RUEPO
acetyltransferase, GNAT family
Tax=BJP_08E140C01_Roseovarius_63_250
DolJOral78_scaffold_5665_12
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12057..12599
DNA (543bp) protein (181aa)
flavin reductase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002FACA2E
Flavin reductase {ECO:0000313|EMBL:KID08436.1}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG1.;"
protein/domain protein typically associated with flavoprotein oxygenase, DIM6/NTAB family
Displaying 12 items

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