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DolJOral78_scaffold_9612

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_9612_1
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..599)
DNA (597bp) protein (199aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1121013 species="Bacteria; Proteobacter
carbohydrate isomerase, KpsF/GutQ family protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A3345
sugar isomerase, KpsF/GutQ family protein
DolJOral78_scaffold_9612_2
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(596..1285)
DNA (690bp) protein (230aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) (EC:3.1.3.45)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00037B5F6A
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:EPX60554.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacterace
DolJOral78_scaffold_9612_3
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(1282..2118)
DNA (837bp) protein (279aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TWB5_9CYAN
DolJOral78_scaffold_9612_4
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(2115..3821)
DNA (1707bp) protein (569aa)
ctp synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=7201138 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
ctp synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFOXYC12_FULL_TA06_54_24_curated
CTP synthase (EC:6.3.4.2)
DolJOral78_scaffold_9612_5
Selenomonas sputigena, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3872..4606)
DNA (735bp) protein (245aa)
3-deoxy-D-manno-octulosonatecytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-k
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) RepID=C9LRN8_SELS3
DolJOral78_scaffold_9612_6
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(4926..5183)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Spirulina subsalsa RepID=UPI0002DDB01D
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC
DolJOral78_scaffold_9612_7
Spiribacter sp. UAH-SP71, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5199..5510)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T4T2_9GAMM
hypothetical protein
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1335757 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae;
DolJOral78_scaffold_9612_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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5890..6819
DNA (930bp) protein (310aa)
thioredoxin reductase (EC:1.8.1.9)
NADPH-dependent thioredoxin reductase Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Thioredoxin reductase id=1732464 bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
DolJOral78_scaffold_9612_9
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6852..7853
DNA (1002bp) protein (334aa)
Fis family transcriptional regulator; K10943 two component system, response regulator FlrC Tax=RBG_13_Deltaproteobacteria_61_14_curated
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP id=4445105 bin=GWF2_Melioribacter_38_21 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
DolJOral78_scaffold_9612_10
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7946..8449
DNA (504bp) protein (168aa)
NADH dehydrogenase (ubiquinone) 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_13_Deltaproteobacteria_51_10_curated
NADH dehydrogenase (Ubiquinone) flavoprotein 2 n=1 Tax=uncultured bacterium RepID=K1ZRQ8_9BACT
NADH dehydrogenase subunit E
DolJOral78_scaffold_9612_11
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

8469..10247
DNA (1779bp) protein (593aa)
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:EFC90100.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EFC90100.1};; Flags: Precursor;; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Sy
nuoF6; NADH-quinone oxidoreductase 51 kDa subunit F (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z2E4_9BACT
DolJOral78_scaffold_9612_12
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10261..13401
DNA (3141bp) protein (1047aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_13_Deltaproteobacteria_61_14_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=4445111 bin=GWF2_Melioribacter_38_21 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Displaying 12 items

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