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DolJOral78_scaffold_9677

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_9677_1
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..663)
DNA (663bp) protein (221aa)
phosphodiesterase; K06950 uncharacterized protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
phosphodiesterase; K06950 uncharacterized protein id=7201254 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
rny; phosphodiesterase
DolJOral78_scaffold_9677_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(882..1214)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XNR0_9BACT id=5225791 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein; K09888 cell division protein ZapA Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
DolJOral78_scaffold_9677_3
unknown

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comp(1283..1552)
DNA (270bp) protein (90aa)

This feature has no annotations

DolJOral78_scaffold_9677_4
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1586..4039)
DNA (2454bp) protein (818aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=SYFB_PELCD
phenylalanyl-tRNA synthetase subunit beta
DolJOral78_scaffold_9677_5
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4036..5061)
DNA (1026bp) protein (342aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TR45_THETC
phenylalanyl-tRNA synthetase subunit alpha
DolJOral78_scaffold_9677_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5159..5512)
DNA (354bp) protein (118aa)
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
50S ribosomal protein L20 id=2049414 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L20
DolJOral78_scaffold_9677_7
Eubacterium saphenum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5561..5758)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0T3_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=592031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source
LSU ribosomal protein L35P
DolJOral78_scaffold_9677_8
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(5872..6438)
DNA (567bp) protein (189aa)
Translation initiation factor IF-3 n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L7I3_9BACT
infC; translation initiation factor IF-3 Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
translation initiation factor IF-3
DolJOral78_scaffold_9677_9
bacterium UASB14, Bacteria

Not on your lists

comp(6642..8486)
DNA (1845bp) protein (615aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
threonyl-tRNA synthetase id=7201687 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
threonyl-tRNA synthetase
DolJOral78_scaffold_9677_trna_1
unknown

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comp(8582..8663)
DNA (82bp)
transferRNA
DolJOral78_scaffold_9677_10
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8768..9622)
DNA (855bp) protein (285aa)
DNA-directed RNA polymerase sigma subunit RpoD n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZVH6_MELRP
DNA-directed RNA polymerase sigma subunit RpoD
DNA-directed RNA polymerase sigma subunit RpoD {ECO:0000313|EMBL:AFN76004.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;"
Displaying 11 items

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