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DolJOral78_scaffold_11873

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_11873_1
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

Not on your lists

comp(1..909)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003776172
two component, sigma54 specific, Fis family transcriptional regulator Tax=RBG_16_RIF05_58_8_curated
sigma-54-dependent transcriptional response regulator
DolJOral78_scaffold_11873_2
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(947..1798)
DNA (852bp) protein (284aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
sugar transferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A7489
undecaprenyl-phosphate galactose phosphotransferase
DolJOral78_scaffold_11873_3
RIFOXYA2_FULL_Berkelbacteria_43_10_curated, Berkelbacteria, Bacteria

Not on your lists

2167..3120
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUL7_HALO1
hypothetical protein Tax=RIFOXYA2_FULL_Berkelbacteria_43_10_curated
hypothetical protein
DolJOral78_scaffold_11873_4
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(3132..4109)
DNA (978bp) protein (326aa)
Periplasmic protein SypC involved in polysaccharide export n=1 Tax=Photobacterium sp. AK15 RepID=L8J7F2_9GAMM
polysaccharide export protein; K01991 polysaccharide export outer membrane protein Tax=RBG_16_Zixibacteria_50_21_curated
periplasmic protein involved in polysaccharide export
DolJOral78_scaffold_11873_5
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4112..5065)
DNA (954bp) protein (318aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IU51_THEET
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EEU61729.1}; TaxID=589861 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source
hypothetical protein
DolJOral78_scaffold_11873_6
unknown

Not on your lists

comp(5148..5480)
DNA (333bp) protein (111aa)

This feature has no annotations

DolJOral78_scaffold_11873_7
unknown

Not on your lists

comp(5491..5718)
DNA (228bp) protein (76aa)

This feature has no annotations

DolJOral78_scaffold_11873_trna_1
unknown

Not on your lists

comp(5823..5896)
DNA (74bp)
transferRNA
DolJOral78_scaffold_11873_8
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(5976..6566)
DNA (591bp) protein (197aa)
UPI0003C7F70A related cluster n=1 Tax=unknown RepID=UPI0003C7F70A
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RBG_13_Chloroflexi_56_8_curated
DNA repair protein RecN
DolJOral78_scaffold_11873_9
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6544..7548)
DNA (1005bp) protein (335aa)
DNA repair protein RecN n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIC3_MOOTA
DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermo
DolJOral78_scaffold_11873_10
RLO_PLX_64_10, Bacteria

Not on your lists

comp(7548..8456)
DNA (909bp) protein (303aa)
NAD(+) kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B9N9_DESCC
inorganic polyphosphate/ATP-NAD kinase
DolJOral78_scaffold_11873_11
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8453..9946)
DNA (1494bp) protein (498aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J3G0_DESRM
deoxyxylulose-5-phosphate synthase
DolJOral78_scaffold_11873_12
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10272..10727)
DNA (456bp) protein (152aa)
membrane protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484338
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:ABW29824.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC
DolJOral78_scaffold_11873_13
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(10729..11640)
DNA (912bp) protein (304aa)
poluprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_13_Acidobacteria_68_16_curated
Geranylgeranyl pyrophosphate synthase n=2 Tax=Singulisphaera acidiphila RepID=L0DR59_SINAD
geranylgeranyl pyrophosphate synthase
DolJOral78_scaffold_11873_14
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11633..12460)
DNA (828bp) protein (276aa)
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00036A1E70
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 1
DolJOral78_scaffold_11873_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12520..13503)
DNA (984bp) protein (328aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262781 species="Bacteria; Firmicutes; Clostrid
Ribonuclease Y n=1 Tax=Clostridium sp. CAG:226 RepID=R5BIJ5_9CLOT
metal dependent phosphohydrolase
Displaying 16 items

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