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DolJOral78_scaffold_1217

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1217_1
Vitis vinifera, Vitis, Vitales, rosids, Streptophyta, Viridiplantae

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comp(125..655)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5AR61_VITVI
Putative uncharacterized protein {ECO:0000313|EMBL:CAN73694.1}; TaxID=29760 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gu
hypothetical protein
DolJOral78_scaffold_1217_2
ACD49, Gracilibacteria, Bacteria

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comp(703..2196)
DNA (1494bp) protein (498aa)
ComEC-like cytoplasmic membrane protein ; K02238 competence protein ComEC id=69470 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
ComEC-like cytoplasmic membrane protein ; K02238 competence protein ComEC Tax=ACD49
DNA internalization-related competence protein ComEC/Rec2
DolJOral78_scaffold_1217_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(2180..2989)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FAM2_9BACT
transmembrane_regions 195..217 Tax=ACD2
DolJOral78_scaffold_1217_4
ACD4, Gracilibacteria, Bacteria

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comp(3067..3624)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F6Y6_9BACT
putative Elongation factor P
Tax=ACD4
DolJOral78_scaffold_1217_5
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(3646..5193)
DNA (1548bp) protein (516aa)
apr:Apre_0953 RNA binding metal dependent phosphohydrolase; K06950 id=35053 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
has:Halsa_1274 metal dependent phosphohydrolase; K06950 Tax=ACD49
metal dependent phosphohydrolase
DolJOral78_scaffold_1217_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(5455..6804)
DNA (1350bp) protein (450aa)
GTPase ObgE n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FYP5_9BACT rbh
obgE; GTPase ObgE; K03979 GTP-binding protein Tax=ACD4
GTPase obg
DolJOral78_scaffold_1217_trna_4
unknown

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comp(6908..6981)
DNA (74bp)
transferRNA
DolJOral78_scaffold_1217_trna_3
unknown

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comp(7049..7120)
DNA (72bp)
transferRNA
DolJOral78_scaffold_1217_trna_2
unknown

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comp(7134..7205)
DNA (72bp)
transferRNA
DolJOral78_scaffold_1217_7
ACD2, Gracilibacteria, Bacteria

Not on your lists

7390..7944
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F6R4_9BACT
coiled-coil 135..163 Tax=ACD2
DolJOral78_scaffold_1217_trna_1
unknown

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7953..8024
DNA (72bp)
transferRNA
DolJOral78_scaffold_1217_8
unknown

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8206..8661
DNA (456bp) protein (152aa)

This feature has no annotations

DolJOral78_scaffold_1217_9
Plasmodium yoelii, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

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8796..10157
DNA (1362bp) protein (454aa)
Uncharacterized protein {ECO:0000313|EMBL:ETB59941.1}; TaxID=1323249 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia).;" source="
DolJOral78_scaffold_1217_10
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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comp(10207..10881)
DNA (675bp) protein (225aa)
ribonuclease HII (EC:3.1.26.4)
Ribonuclease n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GUR9_9BACT
Ribonuclease H {ECO:0000313|EMBL:KKP38998.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
DolJOral78_scaffold_1217_11
ACD49, Gracilibacteria, Bacteria

Not on your lists

10926..12200
DNA (1275bp) protein (425aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74); K08070 2-alkenal reductase [EC:1.3.1.74] Tax=ACD49
Fe-S oxidoreductase (EC:1.8.-.-); K03423 [EC:1.8.-.-]
MiaB-like tRNA modifying enzyme id=33901 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DolJOral78_scaffold_1217_12

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12224..12688
DNA (465bp) protein (155aa)
Lipoprotein signal peptidase; EC=3.4.23.36;; Prolipoprotein signal peptidase; Signal peptidase II; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G7J2_9BACT
DolJOral78_scaffold_1217_13
ACD49, Gracilibacteria, Bacteria

Not on your lists

12664..13413
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GXD7_9BACT
seg 31..41 Tax=ACD49
DolJOral78_scaffold_1217_14
unknown

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13429..13959
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Lachnobacterium bovis RepID=UPI0003B361E8
DolJOral78_scaffold_1217_15
ACD2, Gracilibacteria, Bacteria

Not on your lists


14040..16574
DNA (2535bp) protein (845aa)
tro:trd_0652 gyrA; DNA gyrase, A subunit (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=ACD2
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G877_9BACT rbh
DolJOral78_scaffold_1217_16
ACD3, Gracilibacteria, Bacteria

Not on your lists

16612..18138
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GW31_9BACT
transmembrane_regions 9..31 Tax=ACD3
DolJOral78_scaffold_1217_17

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18150..19631
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GW31_9BACT
Uncharacterized protein; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DolJOral78_scaffold_1217_18
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19669..20838)
DNA (1170bp) protein (390aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
UPI0003C7D101 related cluster n=1 Tax=unknown RepID=UPI0003C7D101
DolJOral78_scaffold_1217_19
ACD3, Gracilibacteria, Bacteria

Not on your lists


21004..21606
DNA (603bp) protein (201aa)
50S ribosomal protein L3 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G7C1_9BACT
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 Tax=ACD3
hypothetical protein
DolJOral78_scaffold_1217_20
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


21623..22246
DNA (624bp) protein (208aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=31748 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=BJP_IG2102_PER_44_74
rplD; 50S ribosomal protein L4
DolJOral78_scaffold_1217_21
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22268..22561
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=2 Tax=Geobacter sulfurreducens RepID=RL23_GEOSL
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geob
DolJOral78_scaffold_1217_22
ACD2, Gracilibacteria, Bacteria

Not on your lists


22586..23431
DNA (846bp) protein (282aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVU3_9BACT rbh
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=ACD2
50S ribosomal protein L2
BD1-5 Jill Banfield (4/7/15)
DolJOral78_scaffold_1217_23
unknown

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23472..23735
DNA (264bp) protein (88aa)
30S ribosomal protein S19 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FAT9_9BACT
30S ribosomal protein S19 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNJ7_9FIRM Tax=ACD78
rpsS; 30S ribosomal protein S19
DolJOral78_scaffold_1217_24
ACD49, Gracilibacteria, Bacteria

Not on your lists


23758..24084
DNA (327bp) protein (109aa)
ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=69443 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=ACD49
rplV; 50S ribosomal protein L22
DolJOral78_scaffold_1217_25
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


24134..24766
DNA (633bp) protein (211aa)
ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=69444 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=CG_GN02-01
rpsC; 30S ribosomal protein S3
DolJOral78_scaffold_1217_26

Not on your lists


24813..25214
DNA (402bp) protein (134aa)
50S ribosomal protein L16 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FZ55_9BACT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
50S ribosomal protein L16
Displaying items 1-30 of 51 in total

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