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DolJOral78_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_109_1
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..1599)
DNA (1599bp) protein (533aa)
Thrombospondin type 3 repeat-containing protein n=4 Tax=Riemerella anatipestifer RepID=E4TD12_RIEAD
thrombospondin type 3 repeat-containing protein
Uncharacterized protein; TaxID=1271752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-2.;"
DolJOral78_scaffold_109_2
unknown

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comp(2484..3308)
DNA (825bp) protein (275aa)

This feature has no annotations

DolJOral78_scaffold_109_3

Not on your lists

comp(3389..5494)
DNA (2106bp) protein (702aa)
tjr:TherJR_2733 excinuclease ABC, B subunit; K03702 excinuclease ABC subunit B id=50473 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
UvrABC system protein B {ECO:0000256|RuleBase:RU003587, ECO:0000256|SAAS:SAAS00009141}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UvrABC system protein B
DolJOral78_scaffold_109_4
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5556..6416)
DNA (861bp) protein (287aa)
Related to sodium/calcium exchange proteins (Partial length) n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AJB8_DESPS
sodium/calcium exchange proteins (partial length)
Related to sodium/calcium exchange proteins (Partial length) {ECO:0000313|EMBL:CAG37562.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; De
DolJOral78_scaffold_109_5
unknown

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6636..9740
DNA (3105bp) protein (1035aa)

This feature has no annotations

DolJOral78_scaffold_109_6
CG_CPR18-01, CG_CPR18, Bacteria

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9832..10251
DNA (420bp) protein (140aa)
Impact protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F774_9BACT
hypothetical protein Tax=CG_CPR18-01
hypothetical protein
DolJOral78_scaffold_109_7

Not on your lists

comp(10318..11358)
DNA (1041bp) protein (347aa)
copper amine oxidase domain-containing protein id=34950 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Copper amine oxidase protein; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DolJOral78_scaffold_109_8
ACD3, Gracilibacteria, Bacteria

Not on your lists

11504..12742
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FC80_9BACT rbh
hypothetical protein Tax=ACD3
hypothetical protein
DolJOral78_scaffold_109_9
GWA2_OD1_44_13b, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

12799..13395
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FIN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT41180.1}; TaxID=1618647 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_13b.;"
hypothetical protein
DolJOral78_scaffold_109_10
unknown

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comp(13399..14811)
DNA (1413bp) protein (471aa)

This feature has no annotations

DolJOral78_scaffold_109_11
CG_GN02-02, Gracilibacteria, Bacteria

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comp(14855..15445)
DNA (591bp) protein (197aa)
RecX 54..201 Tax=CG_GN02-02
RecX 54..201 id=124700 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DolJOral78_scaffold_109_12
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15426..16535)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YH43_9GAMM
Uncharacterized protein; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
DolJOral78_scaffold_109_13
ACD49, Gracilibacteria, Bacteria

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comp(16728..18371)
DNA (1644bp) protein (548aa)
toc:Toce_1366 single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=ACD49
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FUG2_9BACT rbh
recJ; putative single-stranded-DNA-specific exonuclease
DolJOral78_scaffold_109_14
unknown

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comp(18492..19055)
DNA (564bp) protein (188aa)

This feature has no annotations

DolJOral78_scaffold_109_15
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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19289..19699
DNA (411bp) protein (137aa)
Large-conductance mechanosensitive channel n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X174_NITSE
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; Flags: Precursor;; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Nitratifracto
DolJOral78_scaffold_109_trna_1
unknown

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19802..19876
DNA (75bp)
transferRNA
DolJOral78_scaffold_109_16
ACD2, ACD2, ACD2, ACD2, Gracilibacteria, Bacteria

Not on your lists

20091..20990
DNA (900bp) protein (300aa)
Restriction endonuclease-like 62..187 id=35354 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Restriction endonuclease-like 62..187 id=35354 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DolJOral78_scaffold_109_17
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(21265..22278)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZIE1_9BACT rbh
"Winged helix" DNA-binding domain Tax=ACD3
DolJOral78_scaffold_109_18
unknown

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comp(22404..22739)
DNA (336bp) protein (112aa)

This feature has no annotations

DolJOral78_scaffold_109_19
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(22796..25087)
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GFA7_9BACT
transmembrane_regions 10..32 Tax=ACD78
DolJOral78_scaffold_109_20
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(25158..26783)
DNA (1626bp) protein (542aa)
pmx:PERMA_0555 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=ACD49
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FAR9_9BACT rbh
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit B
DolJOral78_scaffold_109_21
ACD78, Gracilibacteria, Bacteria

Not on your lists

26836..27144
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BVC8_9BACT
hypothetical protein Tax=ACD78
DolJOral78_scaffold_109_22
unknown

Not on your lists

comp(27198..28328)
DNA (1131bp) protein (377aa)
Oxygen-independent coproporphyrinogen III oxidase n=7 Tax=Fusobacterium RepID=C3WWD0_9FUSO id=35134 bin=ACD2 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Oxygen-independent coproporphyrinogen III oxidase n=3 Tax=Fusobacterium RepID=C3WII8_9FUSO Tax=ACD49
hypothetical protein
DolJOral78_scaffold_109_23
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(28321..29658)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GCL8_9BACT
transmembrane_regions 7..29 Tax=ACD3
DolJOral78_scaffold_109_24

Not on your lists

comp(29685..29942)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AW80_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66062.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DolJOral78_scaffold_109_25
ACD2, Gracilibacteria, Bacteria

Not on your lists

30115..30492
DNA (378bp) protein (126aa)
Tetratricopeptide TPR_3 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4L1_9BACT
tetratricopeptide TPR_3 Tax=ACD2
hypothetical protein
DolJOral78_scaffold_109_26
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(30620..34639)
DNA (4020bp) protein (1340aa)
dev:DhcVS_544 rpoC; DNA-directed RNA polymerase beta subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=69023 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=CG_GN02-01
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DolJOral78_scaffold_109_27
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(34667..38119)
DNA (3453bp) protein (1151aa)
slp:Slip_2245 DNA-directed RNA polymerase, beta subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=35272 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_GN02-02
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DolJOral78_scaffold_109_28
unknown

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38462..39181
DNA (720bp) protein (240aa)

This feature has no annotations

DolJOral78_scaffold_109_29
unknown

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39323..39757
DNA (435bp) protein (145aa)

This feature has no annotations

Displaying items 1-30 of 93 in total

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