ggKbase home page

DolJOral78_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 92 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_94_1
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167..355)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SQM0_HAHCH
Uncharacterized protein {ECO:0000313|EMBL:EXJ12213.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
hypothetical protein
DolJOral78_scaffold_94_2
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(882..1511)
DNA (630bp) protein (210aa)
ABC-type thiamine transport system, ATPase component n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SLK7_HAHCH
thiQ; thiamine ABC transporter ATPase
ABC-type thiamine transport system, ATPase component {ECO:0000313|EMBL:ABC28467.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" sour
DolJOral78_scaffold_94_3
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1508..3124)
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003758E0A
thiP; thiamine transporter membrane protein
Thiamine transport system, permease component {ECO:0000313|EMBL:ABC28468.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hah
DolJOral78_scaffold_94_4
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3088..4077)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003800AB4
tbpA; thiamine transporter substrate binding subunit
Thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-bind {ECO:0000313|EMBL:ABC28469.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
DolJOral78_scaffold_94_5
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4294..5097)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZR1_HALHL rbh
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
DolJOral78_scaffold_94_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5088..5744)
DNA (657bp) protein (219aa)
ABC transporter related n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQ43_THISH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACL74190.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;"
DolJOral78_scaffold_94_7
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5737..6168)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LSZ0_PHOPR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG19586.1}; TaxID=74109 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundum
DolJOral78_scaffold_94_8
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6333..7184
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WS19_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI22534.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denit
DolJOral78_scaffold_94_9
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7619..9073
DNA (1455bp) protein (485aa)
Betaine-aldehyde dehydrogenase {ECO:0000256|SAAS:SAAS00007649}; EC=1.2.1.8 {ECO:0000256|SAAS:SAAS00007649};; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Ole
Betaine aldehyde dehydrogenase n=1 Tax=Oleispira antarctica RB-8 RepID=R4YR89_OLEAN rbh
betaine aldehyde dehydrogenase
DolJOral78_scaffold_94_10
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9113..10819
DNA (1707bp) protein (569aa)
Choline dehydrogenase {ECO:0000256|RuleBase:RU003969}; EC=1.1.99.1 {ECO:0000256|RuleBase:RU003969};; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;
Choline dehydrogenase n=1 Tax=Oleispira antarctica RB-8 RepID=R4YS15_OLEAN rbh
choline dehydrogenase
DolJOral78_scaffold_94_11
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10873..11790
DNA (918bp) protein (306aa)
ABC-type proline/glycine betaine transport system, periplasmic componen n=1 Tax=Oleispira antarctica RB-8 RepID=R4YV79_OLEAN rbh
ABC-type proline/glycine betaine transport system, periplasmic componen {ECO:0000313|EMBL:CCK77729.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira
glycine betaine ABC transporter substrate-binding protein
DolJOral78_scaffold_94_12
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11933..12760
DNA (828bp) protein (276aa)
Glycine/betaine/L-proline ABC transporter, permease protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YUA6_OLEAN rbh
Glycine/betaine/L-proline ABC transporter, permease protein {ECO:0000313|EMBL:CCK77728.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="
binding-protein dependent transport system inner membrane protein
DolJOral78_scaffold_94_13
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12757..13965
DNA (1209bp) protein (403aa)
ABC-type proline/glycine betaine transport system, ATPase component n=1 Tax=Oleispira antarctica RB-8 RepID=R4YRL0_OLEAN rbh
ABC-type proline/glycine betaine transport system, ATPase component {ECO:0000313|EMBL:CCK77727.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;"
proV; glycine betaine/L-proline transport ATP-binding protein ProV
DolJOral78_scaffold_94_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14010..14612)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036D0F8A
Uncharacterized protein {ECO:0000313|EMBL:EGJ12003.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
hypothetical protein
DolJOral78_scaffold_94_15
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14708..15511)
DNA (804bp) protein (268aa)
Predicted Hydrolase or acyltransferase (Alpha/beta hydrolase superfamily) n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S7U4_HAHCH
alpha/beta fold superfamily hydrolase
Predicted Hydrolase or acyltransferase (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:ABC33280.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahella
DolJOral78_scaffold_94_16
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15498..16208)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6W3J3_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ENO14674.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanh
hypothetical protein
DolJOral78_scaffold_94_17
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16298..16885)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S712_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC33562.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strai
DolJOral78_scaffold_94_18
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17220..19334
DNA (2115bp) protein (705aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SB52_HAHCH
cirA; ferrienterochelin/colicin outer membrane receptor
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:ABC32122.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;
DolJOral78_scaffold_94_19
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19363..20568
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SB51_HAHCH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC32123.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strai
DolJOral78_scaffold_94_20
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20602..21669
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI000364BA9A
putative heme degradation protein
Putative heme degradation protein {ECO:0000313|EMBL:ABC32124.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuen
DolJOral78_scaffold_94_21
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21686..22759
DNA (1074bp) protein (358aa)
Phospholipase n=1 Tax=Oleispira antarctica RB-8 RepID=R4YUQ7_OLEAN rbh
Phospholipase {ECO:0000313|EMBL:CCK76894.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.;"
Zn-dependent hydrolases of the beta-lactamase fold protein
DolJOral78_scaffold_94_22
unknown

Not on your lists

comp(22795..23001)
DNA (207bp) protein (69aa)

This feature has no annotations

DolJOral78_scaffold_94_23
Sulfurospirillum deleyianum, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

23613..23966
DNA (354bp) protein (118aa)
DsrE family protein n=1 Tax=Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) RepID=D1B489_SULD5
DsrE family protein
DsrE family protein {ECO:0000313|EMBL:ACZ12909.1}; TaxID=525898 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospir
DolJOral78_scaffold_94_24
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24096..24803)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KW12_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49647.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanometh
DolJOral78_scaffold_94_25
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25092..26402
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00035F5B71
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CED61106.1}; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella viscosa.;"
DolJOral78_scaffold_94_26
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26417..29356)
DNA (2940bp) protein (980aa)
type III restriction enzyme, res subunit (EC:3.1.21.5) rbh
Type III restriction enzyme, res subunit n=2 Tax=Nitrosococcus oceani RepID=Q3J724_NITOC rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:KFI18108.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococc
DolJOral78_scaffold_94_27
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29463..31337)
DNA (1875bp) protein (625aa)
site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) n=2 Tax=Nitrosococcus oceani RepID=Q3J723_NITOC rbh
DNA methyltransferase {ECO:0000313|EMBL:KFI18109.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-2
DolJOral78_scaffold_94_28
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31455..31835
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FUQ4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ92086.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynu
DolJOral78_scaffold_94_29
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31921..33615)
DNA (1695bp) protein (565aa)
Putative methyl-accepting chemotaxis sensory transducer n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KKA7_SIMAS
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AJQ97911.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;"
DolJOral78_scaffold_94_30
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33797..35926)
DNA (2130bp) protein (710aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curate
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=uncultured Chromatiales bacterium HF0200_41F04 RepID=E0XV24_9GAMM rbh
Displaying items 1-30 of 92 in total

View Taxonomy