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DolJOral78_scaffold_3325

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_3325_1
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..103
DNA (102bp) protein (34aa)
Translation elongation factor Tu (Fragment) n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WSI4_9ALTE
Translation elongation factor Tu
Translation elongation factor Tu {ECO:0000313|EMBL:ENO14511.1}; Flags: Fragment;; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;
DolJOral78_scaffold_3325_trna_1
unknown

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124..196
DNA (73bp)
transferRNA
DolJOral78_scaffold_3325_2
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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221..589
DNA (369bp) protein (123aa)
Protein translocase subunit SecE n=1 Tax=Marinobacter algicola DG893 RepID=A6F188_9ALTE
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1420917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Mar
DolJOral78_scaffold_3325_3
Marinobacter sp. ES-1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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600..1133
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Marinobacter sp. ES-1 RepID=U7G290_9ALTE rbh
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1396858 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromon
DolJOral78_scaffold_3325_4
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1253..1684
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6W327_9ALTE
ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source
DolJOral78_scaffold_3325_5
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1685..2383
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=1 Tax=Hahella ganghwensis RepID=UPI0003760C2B rbh
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (
DolJOral78_scaffold_3325_6
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2567..3097
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=1 Tax=Hahella ganghwensis RepID=UPI000376F8AD
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobact
DolJOral78_scaffold_3325_7
Alteromonadaceae bacterium Bs08, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3136..3513
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=RL7_TERTT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1500539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae.;" source="Alteromonadaceae bact
rplL; 50S ribosomal protein L7/L12
DolJOral78_scaffold_3325_8
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3691..7764
DNA (4074bp) protein (1358aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=RPOB_HAHCH rbh
DolJOral78_scaffold_3325_9
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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7827..12035
DNA (4209bp) protein (1403aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=RPOC_HAHCH
DolJOral78_scaffold_3325_10
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12190..12561
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WUR2_PSEDE
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pse
DolJOral78_scaffold_3325_11
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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12779..13249
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003607182
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax s
rpsG; 30S ribosomal protein S7
DolJOral78_scaffold_3325_12
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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13268..15364
DNA (2097bp) protein (699aa)
elongation factor G n=1 Tax=Hahella ganghwensis RepID=UPI00036ADAA1
Elongation factor G 1 {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G 1 {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahell
fusA1; elongation factor G
DolJOral78_scaffold_3325_13
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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15389..15535
DNA (147bp) protein (49aa)
tuf-1; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Microbulbifer variabilis RepID=UPI00036E25B1
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=1397527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source
DolJOral78_scaffold_3325_14
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15532..16446
DNA (915bp) protein (305aa)
Elongation factor Tu n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YVW5_9ALTE
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacter
Displaying 15 items

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