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DolJOral78_scaffold_179

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Displaying items 1-30 of 80 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_179_1
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195..1238)
DNA (1044bp) protein (348aa)
DNA polymerase III subunit delta n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI00028957FE rbh
DNA polymerase III subunit delta
DNA polymerase III delta subunit {ECO:0000313|EMBL:GAF60431.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychroba
DolJOral78_scaffold_179_2
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1235..1795)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000287DB2D
LPS-assembly lipoprotein RlpB {ECO:0000313|EMBL:GAF60432.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
hypothetical protein
DolJOral78_scaffold_179_3
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1851..4511)
DNA (2661bp) protein (887aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_
Leucine--tRNA ligase n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=SYL_PSYA2 rbh
DolJOral78_scaffold_179_4
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4705..5061
DNA (357bp) protein (119aa)
Arsenate reductase and related protein n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WGH8_PSYWF
Glutathione-dependent thiol reductase {ECO:0000313|EMBL:GAF58230.1}; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psyc
arsenate reductase-like protein
DolJOral78_scaffold_179_5
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5363..6259)
DNA (897bp) protein (299aa)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=1002339 species="Bacteria; Proteobacteria; Gamma
acetylglutamate kinase n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003756EA5 rbh
acetylglutamate kinase
DolJOral78_scaffold_179_6
Aeromonas diversa, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6431..6727)
DNA (297bp) protein (99aa)
carboxymuconolactone decarboxylase n=1 Tax=Aeromonas hydrophila RepID=UPI0002F36C7B
Uncharacterized protein {ECO:0000313|EMBL:ENY73868.1}; TaxID=1268237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas diversa 2478-
hypothetical protein
DolJOral78_scaffold_179_7
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6832..8403)
DNA (1572bp) protein (524aa)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EEV23581.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EEV23581.1};; EC=5.4.2.8 {ECO:0000313|EMBL:EEV23581.1};; TaxID=553217 spec
hypothetical protein n=1 Tax=Moraxella boevrei RepID=UPI00036C9C98 rbh
phosphoglucomutase/phosphomannomutase subunit alpha/beta
DolJOral78_scaffold_179_8
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8733..9197)
DNA (465bp) protein (155aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Psychrobacter lutiphocae RepID=UPI00037429A8
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
DolJOral78_scaffold_179_9
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9252..10286)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RWQ2_BUTPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL34578.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (str
DolJOral78_scaffold_179_10
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10393..12426)
DNA (2034bp) protein (678aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammap
ATP-dependent helicase PcrA n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SST6_9GAMM rbh
UvrD/REP helicase
DolJOral78_scaffold_179_11
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12696..13073)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Moraxella boevrei RepID=UPI00035D0005
Uncharacterized protein {ECO:0000313|EMBL:EEV24111.1}; TaxID=553217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Enhydrobacter.;" source="Enhydrobacter aeros
hypothetical protein
DolJOral78_scaffold_179_12
Moraxella macacae, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13185..15086)
DNA (1902bp) protein (634aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase n=1 Tax=Moraxella macacae 0408225 RepID=L2F7G7_9GAMM
dihydroxy-acid dehydratase
DolJOral78_scaffold_179_13
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15392..17086)
DNA (1695bp) protein (565aa)
long-chain fatty acid CoA ligase (AMP-binding) (EC:6.2.1.3)
Long-chain-fatty-acid-CoA ligase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SPK5_9GAMM rbh
Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:GAF57528.1}; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychroba
DolJOral78_scaffold_179_14
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17306..18178)
DNA (873bp) protein (291aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WCN3_PSYWF rbh
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABQ93424.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psy
DolJOral78_scaffold_179_15
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18229..19011)
DNA (783bp) protein (261aa)
Phosphoglycerate mutase n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QBI5_PSYCK
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ABE74968.1}; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter cryoh
DolJOral78_scaffold_179_16
unknown

Not on your lists

comp(19180..19782)
DNA (603bp) protein (201aa)

This feature has no annotations

DolJOral78_scaffold_179_17
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19821..20378)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI000360605B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ94170.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynu
DolJOral78_scaffold_179_18
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20419..21663)
DNA (1245bp) protein (415aa)
aminoglycoside phosphotransferase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI00028838F5 rbh
Predicted aminoglycoside phosphotransferase {ECO:0000313|EMBL:GAF62401.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source
aminoglycoside phosphotransferase
DolJOral78_scaffold_179_19
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21749..22276)
DNA (528bp) protein (176aa)
DinB family protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1M3R2_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:KJY97465.1}; TaxID=43662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalter
diguanylate cyclase
DolJOral78_scaffold_179_20
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22534..23787)
DNA (1254bp) protein (418aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EGK14381.1}; EC=1.3.99.- {ECO:0000313|EMBL:EGK14381.1};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae;
Acyl-CoA dehydrogenase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SP55_9GAMM
acyl-CoA dehydrogenase domain-containing protein
DolJOral78_scaffold_179_21
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23941..24813
DNA (873bp) protein (291aa)
Transcriptional regulator n=1 Tax=Acinetobacter baumannii BJAB0715 RepID=S5CSB0_ACIBA
Transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EAU69769.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella
DolJOral78_scaffold_179_22
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24838..25683)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Psychrobacter sp. G RepID=S4YUL8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP48649.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. G
DolJOral78_scaffold_179_23
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25821..26252
DNA (432bp) protein (144aa)
Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC:3.6.1.17)
Histidine triad domain protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q070_9GAMM
Histidine triad domain protein {ECO:0000313|EMBL:EEV22019.1}; TaxID=553217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Enhydrobacter.;" source="Enhydrobacte
DolJOral78_scaffold_179_24
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26469..28442
DNA (1974bp) protein (658aa)
transporter n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI00028872FB
Probable outer membrane protein {ECO:0000313|EMBL:GAF53504.1}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobac
outer membrane efflux protein
DolJOral78_scaffold_179_25
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28480..30768
DNA (2289bp) protein (763aa)
ABC transporter related protein n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WDH1_PSYWF
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABQ93712.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobact
DolJOral78_scaffold_179_26
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30781..31950
DNA (1170bp) protein (390aa)
secretion protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003783C85 rbh
HlyD family secretion protein {ECO:0000313|EMBL:EGK14911.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
HlyD family type I secretion membrane fusion protein
DolJOral78_scaffold_179_27
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


32121..32432
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=2 Tax=Psychrobacter RepID=RL21_PSYWF
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
DolJOral78_scaffold_179_28
Moraxella macacae, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


32483..32737
DNA (255bp) protein (85aa)
50S ribosomal protein L27 n=1 Tax=Psychrobacter lutiphocae RepID=UPI00037D5F12
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1230338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella macaca
rpmA; 50S ribosomal protein L27
DolJOral78_scaffold_179_29
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33065..33445)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003697D90
Uncharacterized protein {ECO:0000313|EMBL:EON78701.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein
DolJOral78_scaffold_179_30
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33494..33865)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036C1754
Glyoxalase family protein {ECO:0000313|EMBL:GAL85034.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.
hypothetical protein
Displaying items 1-30 of 80 in total

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