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DolJOral78_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_238_1
Moraxella bovis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..3124)
DNA (3123bp) protein (1041aa)
FHA-like protein n=1 Tax=Moraxella bovis RepID=Q5KTA3_MORBO rbh
FHA-like protein {ECO:0000313|EMBL:BAD83731.1}; TaxID=476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella bovis.;"
hemagglutinin/hemolysin-related protein
DolJOral78_scaffold_238_2
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3388..5079
DNA (1692bp) protein (564aa)
von Willebrand factor type A domain protein n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SP49_9GAMM rbh
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EGK14375.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source
von Willebrand factor type A domain-containing protein rbh
DolJOral78_scaffold_238_3
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5240..5947
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1KP50_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG18729.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
DolJOral78_scaffold_238_4
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6153..7562)
DNA (1410bp) protein (470aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
glutamyl-tRNA reductase n=1 Tax=Psychrobacter lutiphocae RepID=UPI000372738A rbh
hemA; glutamyl-tRNA reductase
DolJOral78_scaffold_238_5
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7762..9660
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FVB0_PSYA2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ18048.1}; TaxID=259536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter arcti
DolJOral78_scaffold_238_6
Psychrobacter sp. JCM 18901, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9730..10317
DNA (588bp) protein (196aa)
Outer membrane lipoprotein LolB n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4TA90_9GAMM
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=1298609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrob
membrane protein
DolJOral78_scaffold_238_7
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10344..11237
DNA (894bp) protein (298aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5STR3_9GAMM
4-diphosphocytidyl-2C-methyl-D-erythritol kinase
DolJOral78_scaffold_238_trna_1
unknown

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11315..11387
DNA (73bp)
transferRNA
DolJOral78_scaffold_238_trna_2
unknown

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11542..11614
DNA (73bp)
transferRNA
DolJOral78_scaffold_238_8
Psychrobacter sp. JCM 18901, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11751..12695
DNA (945bp) protein (315aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003760704
DolJOral78_scaffold_238_9
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12851..13510
DNA (660bp) protein (220aa)
50S ribosomal protein L25 n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=RL25_PSYCK
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomo
DolJOral78_scaffold_238_10
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13543..14130
DNA (588bp) protein (196aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5STR6_9GAMM rbh
peptidyl-tRNA hydrolase
DolJOral78_scaffold_238_11
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14238..14618
DNA (381bp) protein (127aa)
Aspartate 1-decarboxylase {ECO:0000255|HAMAP-Rule:MF_00446}; EC=4.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00446};; Aspartate alpha-decarboxylase {ECO:0000255|HAMAP-Rule:MF_00446}; Contains:; Aspartate 1-dec
Aspartate 1-decarboxylase n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=PAND_PSYWF
aspartate alpha-decarboxylase
DolJOral78_scaffold_238_12
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14744..15706
DNA (963bp) protein (321aa)
CaCA family calcium (Ca2+):cation antiporter n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5STR8_9GAMM rbh
CaCA family calcium (Ca2+):cation antiporter {ECO:0000313|EMBL:EGK07852.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" sourc
CaCA family Na(+)/Ca(+) antiporter
DolJOral78_scaffold_238_13
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16044..17858
DNA (1815bp) protein (605aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WBP6_PSYWF rbh
sodium/hydrogen exchanger
Sodium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ABQ93087.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psych
DolJOral78_scaffold_238_14
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18040..18612)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000288FE56
Protein of hypothetical function YGGT {ECO:0000313|EMBL:EGK14148.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psyc
hypothetical protein
DolJOral78_scaffold_238_15
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18783..19610)
DNA (828bp) protein (276aa)
pyrroline-5-carboxylate reductase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000288854F rbh
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925}
pyrroline-5-carboxylate reductase
DolJOral78_scaffold_238_16
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19735..20265)
DNA (531bp) protein (177aa)
Protoporphyrinogen oxidase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BI14_ZUNPS
protoporphyrinogen oxidase
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ADF51402.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profu
DolJOral78_scaffold_238_17
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20364..22130)
DNA (1767bp) protein (589aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000313|EMBL:CCE24635.1}; EC=1.8.1.2 {ECO:0000313|EMBL:CCE24635.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; M
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T1W1_META2
cysJ; sulfite reductase [NADPH] flavoprotein alpha-component
DolJOral78_scaffold_238_18
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22302..24053)
DNA (1752bp) protein (584aa)
Sulfite reductase (NADPH) flavoprotein alpha-component (EC:1.8.1.2)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207};; TaxID=754477 species
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YFQ9_METFJ
DolJOral78_scaffold_238_19
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24080..29644)
DNA (5565bp) protein (1855aa)
glutamate synthase (NADPH) large subunit (EC:1.4.1.13)
Glutamate synthase (NADPH) large chain {ECO:0000313|EMBL:AFJ01753.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AFJ01753.1};; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Pi
Glutamate synthase (NADPH) large chain n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YFR0_METFJ
DolJOral78_scaffold_238_20
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30158..31198)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SPC7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGK14313.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
hypothetical protein
DolJOral78_scaffold_238_21
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31373..32467)
DNA (1095bp) protein (365aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1354303 species="Bacteri
3-dehydroquinate synthase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000287E395
3-dehydroquinate synthase
DolJOral78_scaffold_238_22
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32569..33126)
DNA (558bp) protein (186aa)
aroK; Shikimate kinase 1 (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=480 species="Bacteria; Proteobacteria; Gammaprote
Shikimate kinase n=11 Tax=Moraxella catarrhalis RepID=D5VDE2_MORCR
DolJOral78_scaffold_238_23
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33763..34770
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SNT8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK14630.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
hypothetical protein rbh
DolJOral78_scaffold_238_24
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34947..36629)
DNA (1683bp) protein (561aa)
Type II and III secretion system protein n=1 Tax=Psychrobacter sp. G RepID=S4YXL9_9GAMM
type II and III secretion system protein
Type II and III secretion system protein {ECO:0000313|EMBL:AGP49822.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Ps
DolJOral78_scaffold_238_25
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(36772..37407)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Moraxella boevrei RepID=UPI00037622A9
Type IV pilus biogenesis protein PilP {ECO:0000313|EMBL:ERL56619.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psyc
DolJOral78_scaffold_238_26
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37397..38191)
DNA (795bp) protein (265aa)
pilus assembly protein PilO n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000289035A
Type IV pilus biogenesis protein PilO {ECO:0000313|EMBL:GAF61535.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psyc
pilus assembly protein PilO
DolJOral78_scaffold_238_27
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38191..38784)
DNA (594bp) protein (198aa)
Type IV pilus biogenesis protein PilN n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4T938_9GAMM
Type IV pilus biogenesis protein PilN {ECO:0000313|EMBL:ERL56621.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psyc
pilus protein PilS
DolJOral78_scaffold_238_28
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38784..39818)
DNA (1035bp) protein (345aa)
pilus assembly protein PilM n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI0002886D6D
Type IV pilus biogenesis protein PilM {ECO:0000313|EMBL:GAF52422.1}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psyc
pilM; type IV pilus assembly protein
Displaying items 1-30 of 71 in total

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